Update test code to deal with the switch to storing archive

qseq files instead of srf files

diff --git a/htsworkflow/pipelines/test/test_extract_results.py b/htsworkflow/pipelines/test/test_extract_results.py
index ee0c540e1eac4f836482b118de53434866afe617..b64bd0f7f9a8cc4bfcf0a3715efeff05029bf300 100644 (file)
--- a/htsworkflow/pipelines/test/test_extract_results.py
+++ b/htsworkflow/pipelines/test/test_extract_results.py
@@ -76,8 +76,8 @@ class RunfolderExtractTests(unittest.TestCase):
         self.failUnlessEqual(len(runs), 1)
         runfolder.extract_results(runs, self.temp_dir, site='asite')
         archive = os.listdir(os.path.join(self.temp_dir, '4286GAAXX', 'C1-38'))
-        self.failUnlessEqual(len(archive), 19)
-        self.failUnless('asite_090608_HWI-EAS229_0117_4286GAAXX_6.srf' in archive)
+        self.failUnlessEqual(len(archive), 34)
+        self.failUnless('asite_090608_HWI-EAS229_0117_4286GAAXX_l6_r1.tar.bz2' in archive)
 
         
 def suite():