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make a more informative log message
author
Diane Trout
<diane@caltech.edu>
Mon, 30 Nov 2015 21:48:30 +0000
(13:48 -0800)
committer
Diane Trout
<diane@caltech.edu>
Mon, 30 Nov 2015 21:48:30 +0000
(13:48 -0800)
htsworkflow/submission/submission.py
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diff --git
a/htsworkflow/submission/submission.py
b/htsworkflow/submission/submission.py
index a27391d6e1cd3ac8c9c542b94d089f042b9fa48c..c70aece073b1c2e40f76548d18e8cdd227a05901 100644
(file)
--- a/
htsworkflow/submission/submission.py
+++ b/
htsworkflow/submission/submission.py
@@
-173,11
+173,11
@@
class Submission(object):
RDF.Statement(fileNode, dafTermOntology['md5sum'], md5))
def add_file_size(self, filename, fileNode, analysis_dir):
RDF.Statement(fileNode, dafTermOntology['md5sum'], md5))
def add_file_size(self, filename, fileNode, analysis_dir):
- LOGGER.debug("Updating file size")
submission_pathname = os.path.join(analysis_dir, filename)
file_size = os.stat(submission_pathname).st_size
self.model.add_statement(
RDF.Statement(fileNode, dafTermOntology['file_size'], toTypedNode(file_size)))
submission_pathname = os.path.join(analysis_dir, filename)
file_size = os.stat(submission_pathname).st_size
self.model.add_statement(
RDF.Statement(fileNode, dafTermOntology['file_size'], toTypedNode(file_size)))
+ LOGGER.debug("Updating file size: %d", file_size)
def add_read_length(self, filename, fileNode, analysis_dir):
submission_pathname = os.path.join(analysis_dir, filename)
def add_read_length(self, filename, fileNode, analysis_dir):
submission_pathname = os.path.join(analysis_dir, filename)