mapper = daf.UCSCSubmission(name, daf_file = test_daf_stream, model=model)
return mapper
-def dump_model(model):
- writer = get_serializer()
- turtle = writer.serialize_model_to_string(model)
- print turtle
-
class TestUCSCSubmission(TestCase):
def setUp(self):
view = daf_mapper.find_view('filename_r1.fastq')
- # dump_model(daf_mapper.model)
view_root = 'http://jumpgate.caltech.edu/wiki/SubmissionsLog/{0}/view/'
view_root = view_root.format(name)
self.failUnlessEqual(str(view.uri),
libNode,
filename)
- #dump_model(daf_mapper.model)
-
sub_root = "http://jumpgate.caltech.edu/wiki/SubmissionsLog/testfind/"
submission_name = sub_root + analysis_name
source = daf_mapper.model.get_source(rdfNS['type'], submissionOntology['submission'])