Added installation notes
authorTim Reddy Tim <treddy@hudsonalpha.org>
Sat, 30 Aug 2008 00:02:32 +0000 (00:02 +0000)
committerTim Reddy Tim <treddy@hudsonalpha.org>
Sat, 30 Aug 2008 00:02:32 +0000 (00:02 +0000)
htswanalysis/INSTALL_NOTES [new file with mode: 0644]

diff --git a/htswanalysis/INSTALL_NOTES b/htswanalysis/INSTALL_NOTES
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+First: LibrariesMakefile
+
+i) Set up sequence repository
+ii) Build binaries
+iii) Perl packages: XML::Simple, Statistics::Descriptive
+iv) Build reference data
+
+1) Set ROOT_DIR, DATA_DIR, and HTML_DIR in LibrariesMakefile
+
+Second: Projects/Tasks: ConfigureTasks.pm
+
+i) Build QuEST
+ii) NEED (TODO): Platform Version of BioProspector/genomebg
+iii) MACS installation
+iv) WingWong's Peak Caller (TODO: Need License)
+
+Parameters:
+my $root_dir = shift; (htswanalysis)
+my $data_dir = shift; (data repository base)
+my $parm = shift; ("all")
+
+Set url for getProjects in scripts/analys_track_comm.py
+
+.
+.
+. (this is where the felcat server crashed and burned)