Call print(msg) instead of print msg

diff --git a/htsworkflow/pipelines/genome_mapper.py b/htsworkflow/pipelines/genome_mapper.py
index a080e5773777664a038ca2b2bcca22f4ab9fb1eb..4f57bbbaac97f4742fcee673b9ff17fd320f632d 100644 (file)
--- a/htsworkflow/pipelines/genome_mapper.py
+++ b/htsworkflow/pipelines/genome_mapper.py
@@ -132,13 +132,13 @@ class constructMapperDict(object):
 if __name__ == '__main__':
 
   if len(sys.argv) != 2:
-    print 'useage: %s <base_genome_dir>' % (sys.argv[0])
+    print('useage: %s <base_genome_dir>' % (sys.argv[0]))
     sys.exit(1)
 
   d = getAvailableGenomes(sys.argv[1])
   d2 = constructMapperDict(d)
 
   for k,v in d2.items():
-    print '%s: %s' % (k,v)
+    print('%s: %s' % (k,v))
 
 

diff --git a/htsworkflow/pipelines/qseq2fastq.py b/htsworkflow/pipelines/qseq2fastq.py
index c33d0143228568b36d216986bf0aad47f60d57b9..15f1536bbf13844b64b1affc0a763040becf2c97 100644 (file)
--- a/htsworkflow/pipelines/qseq2fastq.py
+++ b/htsworkflow/pipelines/qseq2fastq.py
@@ -19,7 +19,7 @@ def main(cmdline=None):
     opts, args = parser.parse_args(cmdline)
 
     if opts.version:
-        print version()
+        print(version())
         return 0
 
     if opts.infile is not None: