replace % with %% in the library names, so retrieve config's % expansion works.

diff --git a/htsworkflow/frontend/eland_config/views.py b/htsworkflow/frontend/eland_config/views.py
index 7f8daac0607557901fe9399f4b1302fc42133ad7..31b970f58b9b4f94e266a939f0a299ac3e849ac6 100644 (file)
--- a/htsworkflow/frontend/eland_config/views.py
+++ b/htsworkflow/frontend/eland_config/views.py
@@ -268,22 +268,22 @@ def getElandConfig(flowcell, regenerate=False):
   
   #Convert all newline conventions to unix style
   l1d = str(fcObj.lane_1_library.library_id) + '|' \
-          + fcObj.lane_1_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_1_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l2d = str(fcObj.lane_2_library.library_id) + '|' \
-          + fcObj.lane_2_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_2_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l3d = str(fcObj.lane_3_library.library_id) + '|' \
-          + fcObj.lane_3_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_3_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l4d = str(fcObj.lane_4_library.library_id) + '|' \
-          + fcObj.lane_4_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_4_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   
   l5d = str(fcObj.lane_5_library.library_id) + '|' \
-          + fcObj.lane_5_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_5_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l6d = str(fcObj.lane_6_library.library_id) + '|' \
-          + fcObj.lane_6_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_6_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l7d = str(fcObj.lane_7_library.library_id) + '|' \
-          + fcObj.lane_7_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_7_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   l8d = str(fcObj.lane_8_library.library_id) + '|' \
-          + fcObj.lane_8_library.library_name.replace('\r\n', '\n').replace('\r', '\n')
+          + fcObj.lane_8_library.library_name.replace('\r\n', '\n').replace('\r', '\n').replace('%', '%%')
   
   # Turn new lines into indented commented newlines
   l1d = l1d.replace('\n', '\n#  ')