Minor typeo fix

diff --git a/htswanalysis/scripts/Flowcell_QC_Makefile b/htswanalysis/scripts/Flowcell_QC_Makefile
index 1c94fd02691bb0de73d9d13dd582925214297dec..f57061ddeb0d322989e34007365d8c7f4636b38f 100644 (file)
--- a/htswanalysis/scripts/Flowcell_QC_Makefile
+++ b/htswanalysis/scripts/Flowcell_QC_Makefile
@@ -13,7 +13,7 @@ PERCENT_BASE_IMAGES=$(shell ls -1d *.pf.txt.gz | sed -e s/pf.txt.gz/percent_base
 all: $(QPCR_FILES) $(PROFILE_FILES) $(CMPLX_FILES) $(PROFILE_IMAGES) $(PERCENT_BASE_IMAGES) $(COUNT_FILES) $(FILES) $(FLOWCELL)_qPCR_summary.txt $(FLOWCELL)_qPCR_summary.html $(FLOWCELL)_LibraryInfo.xml $(FLOWCELL)_SequencingSummary.html $(FLOWCELL)_QC_Summary.html
 
 %.txt.complexity: %.txt
-       $(ROOT_DIR)/bin/complexity_count `basename $<` $< > $@
+       $(EXPTRACK_DIR)/bin/complexity_count `basename $<` $< > $@
 
 %.txt.count: %.txt
        grep -v contam $< | awk '{if(NF > 3) {print $$1} }' | wc -l > $@;