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Report cluster results with the rest of the lane summary information.
[htsworkflow.git]
/
gaworkflow
/
2008-04-22
Diane Trout
also since nothing is currently using the pipelineFinis...
tree
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commitdiff
2008-04-22
Diane Trout
Extend makebed to lookup metadata out of a copy of...
tree
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commitdiff
2008-04-21
Diane Trout
split the library script into a reusable database/repor...
tree
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commitdiff
2008-04-19
Lorian Schaeffer
Added the same changes I made to the 1.1 branch, all...
tree
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commitdiff
2008-03-25
Lorian Schaeffer
Put ten_nM_dilution field back in library table, and...
tree
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commitdiff
2008-03-21
Lorian Schaeffer
Hopefully undid accidental changes to views.py and...
tree
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commitdiff
2008-03-21
Lorian Schaeffer
Added a dropdown status field to flowcell table
tree
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commitdiff
2008-03-20
Lorian Schaeffer
Created table Person, with required fields "name" and...
tree
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commitdiff
2008-03-20
Lorian Schaeffer
Flowcell patch:
tree
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commitdiff
2008-03-20
Lorian Schaeffer
Removed fields kit_#_lot from library table (they were...
tree
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commitdiff
2008-03-19
Lorian Schaeffer
Library patch:
tree
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commitdiff
2008-01-29
Diane Trout
DummyOptions didn't define a genome_dir member before...
tree
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commitdiff
2008-01-23
Diane Trout
return most recent genome build for the pipeline config...
tree
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commitdiff
2008-01-23
Brandon King
Latest genome build, eland_config file temp. solution...
tree
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commitdiff
2008-01-17
Brandon King
Added a new get_cycles(recipe_xml_filepath) function in
tree
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commitdiff
2008-01-16
Brandon King
Spoolwatch function for getting cycle number from Recip...
tree
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commitdiff
2008-01-16
Brandon King
Attempt to support case insensitive config file names.
tree
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commitdiff
2008-01-16
Brandon King
Fix for tickets #45 & #47
tree
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commitdiff
2008-01-15
Diane Trout
Oops, forgot to provide a null body to my the stub...
tree
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commitdiff
2008-01-15
Diane Trout
pyinotify rm_watch takes a list, not a dictionary.
tree
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commitdiff
2008-01-15
Diane Trout
move the autotmation scripts into gaworkflow.automation
tree
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commitdiff
2008-01-09
Diane Trout
always trigger a copy when we receive the sequencingFin...
tree
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commitdiff
2008-01-08
Diane Trout
make sequencingFinished return something instead of...
tree
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commitdiff
2008-01-08
Diane Trout
Remove unnecessary code from the runner.py module
tree
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commitdiff
2008-01-04
Diane Trout
use \w for alphanumeric flow cell IDs
tree
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commitdiff
2008-01-04
Brandon King
Runner now reports status when user sends status request!
tree
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commitdiff
2008-01-04
Brandon King
Runner now notifies users about success or failure...
tree
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commitdiff
2008-01-04
Brandon King
Runner seems to work with running the pipeline when...
tree
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commitdiff
2008-01-04
Brandon King
Work towards getting runner to work properly.
tree
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commitdiff
2008-01-04
Brandon King
Ok, one more option required.
tree
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commitdiff
2008-01-04
Brandon King
Forgot an option in the DummyOptions object.
tree
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commitdiff
2008-01-03
Brandon King
Work towards disabling command-line parsing outside...
tree
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commitdiff
2008-01-02
Brandon King
Updated regexs to support new and "improved" flow cell...
tree
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commitdiff
2007-12-30
Diane Trout
direntry parser wasn't eating a trailing newline
tree
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commitdiff
2007-12-30
Diane Trout
forgot to rename the caller and called when refactoring...
tree
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commitdiff
2007-12-30
Diane Trout
split rsync directory listing correctly
tree
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commitdiff
2007-12-22
Diane Trout
add a , to make customizing list of template dirs easier
tree
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commitdiff
2007-12-21
Brandon King
Work towards a working runner bot... still needs a...
tree
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commitdiff
2007-12-14
Brandon King
[project @ gaworkflow.runner progress]
tree
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commitdiff
2007-12-11
Diane Trout
[project @ add skeleton for runner]
tree
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commitdiff
2007-12-11
Diane Trout
[project @ send messages to notify_runner not self...
tree
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commitdiff
2007-12-11
Brandon King
[project @ Bypass pipe lock mystery bug for configure...
tree
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commitdiff
2007-12-11
Diane Trout
[project @ add a parser to spoolwatcher]
tree
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commitdiff
2007-12-04
Brandon King
[project @ Config Step: Detect missing cycles patch]
tree
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commitdiff
2007-12-10
Diane Trout
[project @ rename runFinished to sequencingFinished]
tree
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commitdiff
2007-12-10
Diane Trout
[project @ make spoolwatcher a benderjab bot]
tree
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commitdiff
2007-12-10
Diane Trout
[project @ use XmlRpcBot.rpc_send]
tree
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commitdiff
2007-12-10
Diane Trout
[project @ Require a resource for JIDs that are used...
tree
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commitdiff
2007-12-10
Diane Trout
[project @ moved check_option into benderjab]
tree
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commitdiff
2007-12-08
Diane Trout
[project @ update CopierBot to new logging daemonizable...
tree
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commitdiff
2007-11-30
Brandon King
[project @ Small documentation fix for retrieve_config.]
tree
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commitdiff
2007-11-30
Brandon King
[project @ Scientific name is no longer a unique field.]
tree
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commitdiff
2007-11-27
Brandon King
[project @ Missing __init__.py file in pipeline subpack...
tree
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commitdiff
2007-11-26
Brandon King
[project @ run_status gerald correction (over estimated...
tree
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commitdiff
2007-11-26
Brandon King
[project @ run_status correct firecrest expected file...
tree
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commitdiff
2007-11-22
Brandon King
[project @ Run default changed to full run]
tree
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commitdiff
2007-11-22
Brandon King
[project @ Shortend the s_generating regex; minor bug...
tree
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commitdiff
2007-11-21
Brandon King
[project @ Monitor status implementation + config_pipel...
tree
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commitdiff
2007-11-20
Brandon King
[project @ Added GARunStatus class for tracking percent...
tree
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commitdiff
2007-11-20
Brandon King
[project @ Moved ga_frontend to gaworkflow.frontend...
tree
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commitdiff
2007-11-20
Diane Trout
[project @ move brandon's pipeline handling code into...
tree
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commitdiff
2007-11-20
Diane Trout
[project @ rename python module to gaworkflow from...
tree
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commitdiff