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convert some print statements to logger messages
[htsworkflow.git] / htsworkflow /
2015-01-29 Diane Troutconvert some print statements to logger messages tree | commitdiff
2015-01-29 Diane Troutconvert to print_function, and start adding unicode_lit... tree | commitdiff
2015-01-29 Diane Troutremove ,'s from more except blocks, and now a raise too tree | commitdiff
2015-01-29 Diane Troutmore use six.moves to import StringIO tree | commitdiff
2015-01-29 Diane Troutuse six.moves to get to python3-style urllib tree | commitdiff
2015-01-29 Diane Troutwhitespace-cleanup tree | commitdiff
2015-01-29 Diane Troutremove some commented out code tree | commitdiff
2015-01-29 Diane Troutconvert to print_function tree | commitdiff
2015-01-29 Diane Troutuse six to work around rename of configparser tree | commitdiff
2015-01-29 Diane TroutConvert old style except blocks to except Exception... tree | commitdiff
2015-01-28 Diane Troutmake the search tool more flexible tree | commitdiff
2015-01-21 Diane TroutUpdate test_retrieve_config to work with factories tree | commitdiff
2015-01-14 Diane Troutfix spelling error in module name tree | commitdiff
2015-01-13 Diane TroutDon't pass null authentication information to ENCODED. tree | commitdiff
2015-01-13 Diane Troutuse absolute_import and print_function tree | commitdiff
2015-01-10 Diane Troutget_schema_url only works on object types now, so chang... tree | commitdiff
2015-01-10 Diane Troutat some point I added code that used base64, hashlib... tree | commitdiff
2014-12-13 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor... tree | commitdiff
2014-12-13 Diane TroutAdd document registration class. tree | commitdiff
2014-12-13 Diane Troutadd more type checking for parsing object type from... tree | commitdiff
2014-12-13 Diane Troutadd some helpful log messages tree | commitdiff
2014-12-01 Diane Troutcommit script to copy jumpgate sqlite database to felca... tree | commitdiff
2014-11-07 Diane TroutAdd some code to help read metadata out of spreadsheets. tree | commitdiff
2014-10-29 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor... tree | commitdiff
2014-10-27 Diane TroutChange the settings default to work with the two scoops... tree | commitdiff
2014-10-23 Diane Troutimport os, so we can use os.path.join tree | commitdiff
2014-09-12 Diane Troutmake it easier to override variables in ENCODED class tree | commitdiff
2014-07-25 Diane TroutUse two-scoop style multiple settings file. tree | commitdiff
2014-07-24 Diane TroutDCC example code sets both content-type and accept... tree | commitdiff
2014-07-24 Diane Troutpep8 whitespace cleanup. tree | commitdiff
2014-07-24 Diane TroutFlatten project hierarchy, moving djano applications... tree | commitdiff
2014-06-23 Diane Troutwhitespace cleanup tree | commitdiff
2014-06-23 Diane Troutclean up for pep8 compliance. tree | commitdiff
2014-06-23 Diane Troutcode cleanup, remove commented out code and adjust... tree | commitdiff
2014-06-23 Diane TroutAttempt to split common initial data from wold lab... tree | commitdiff
2014-06-23 Diane TroutRemove very old misplaced initial data fixtures tree | commitdiff
2014-06-19 Diane TroutAdd fields list to a few ModelForms Meta class. tree | commitdiff
2014-06-19 Diane TroutRename get_query_set to get_queryset tree | commitdiff
2014-06-19 Diane TroutRename HttpResponse parameter mimetype to content_type tree | commitdiff
2014-06-19 Diane Troutremove file created by typoing file name tree | commitdiff
2014-06-19 Diane TroutChange unittest2 back into unittest. tree | commitdiff
2014-06-19 Diane TroutExplicitly list initial_data.json for the test data... tree | commitdiff
2014-06-10 Diane TroutAdd post_json as some DCC objects are created with... tree | commitdiff
2014-06-10 Diane TroutRename headers to json_headers for requests (seemed... tree | commitdiff
2014-06-10 Diane TroutUpdates to jsonld context for the DCC schemas. tree | commitdiff
2014-06-10 Diane TroutUpdate test_encoded test cases due to https now being... tree | commitdiff
2014-06-10 Diane TroutDCC switched to https tree | commitdiff
2014-06-10 Diane TroutUpdate fastqname code & test code to better support... tree | commitdiff
2014-06-10 Diane TroutDirectly generate compressed fastq files from HiSeq... tree | commitdiff
2014-06-10 Diane Troutthe filename templates were moved from condorfastq... tree | commitdiff
2014-06-10 Diane TroutIndicate when desplit_fastq didn't get any files to... tree | commitdiff
2014-06-10 Diane TroutMake sure we can load a run file that lacks alignment... tree | commitdiff
2014-06-10 Diane TroutFor some reason the previous integrety fixes, added... tree | commitdiff
2014-06-10 Diane TroutPostgresql has referential integrety checking. tree | commitdiff
2014-06-10 Diane TroutIgnore the path when comparing filenames from the md5... tree | commitdiff
2014-06-10 Diane Troutuse autoopen to access fastq files tree | commitdiff
2014-06-10 Diane TroutStart implementing tool to compute library fastq quality tree | commitdiff
2014-06-10 Diane TroutJust use the python 2 url parsers instead of trying... tree | commitdiff
2014-06-10 Diane TroutUpdate timestamps in inventory app test data to be... tree | commitdiff
2014-06-10 Diane Troutpoint default flowcell directory to test data tree | commitdiff
2014-06-10 Diane Troutadd default values for some application specific values tree | commitdiff
2014-06-10 Diane TroutConfigure default STATICFILES_DIRS for static files... tree | commitdiff
2014-06-10 Diane TroutMathematica had a suggestion for a fastq mime type... tree | commitdiff
2014-06-10 Diane TroutRegex pattern was wrong. tree | commitdiff
2014-06-10 Diane TroutConvert more timestamps to include timezone tree | commitdiff
2014-06-10 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2014-02-18 Diane TroutAdd option to compress fastq file tree | commitdiff
2014-02-12 Diane TroutAllow arbitrarily long regexes in experiment.FileType... tree | commitdiff
2014-01-22 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2014-01-22 Diane Troutpass filters a string not an undefined variable tree | commitdiff
2014-01-17 Diane TroutRemove django test environment setup code. tree | commitdiff
2014-01-17 Diane TroutConvert timestamps from the runfolder file to a timezon... tree | commitdiff
2014-01-17 Diane Troutdjango provides django.utils.timezone.now to return... tree | commitdiff
2014-01-17 Diane TroutSet default timezone to where our lab is located tree | commitdiff
2014-01-17 Diane TroutUpdate test data dates to have timezone information tree | commitdiff
2014-01-17 Diane TroutFix test to use newer django database dictionary instea... tree | commitdiff
2014-01-17 Diane TroutRe-add default email addresses for email notification... tree | commitdiff
2014-01-17 Diane TroutImplement a encoded search to json-ld wrapper. tree | commitdiff
2014-01-17 Diane Troutmake sure @vocab url has a trailing #. Its needed to... tree | commitdiff
2014-01-17 Diane TroutUse new context creation functions to attach context... tree | commitdiff
2014-01-17 Diane TroutAdd functions to create a json-ld context and add names... tree | commitdiff
2014-01-15 Diane TroutUtility class for accessing ENCODE3's submit / data... tree | commitdiff
2014-01-15 Diane TroutAdapter to use PyLD's json-ld parser to add triples... tree | commitdiff
2014-01-15 Diane Troutremove some trailing whitespace tree | commitdiff
2014-01-15 Diane Troutremove some trailing whitespace tree | commitdiff
2014-01-15 Diane TroutAdd option to get_model to disable RDF graph context. tree | commitdiff
2014-01-08 Diane TroutRename stripNamespace strip_namespace tree | commitdiff
2013-12-23 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2013-12-23 Diane Troutupdate settings for new location of WSGI_APPLICATION... tree | commitdiff
2013-12-23 Diane Troutfix quote typos with the {% static %} template tag tree | commitdiff
2013-12-23 Diane TroutMove wsgi into the actual project root. tree | commitdiff
2013-12-17 Diane Troutremove some test code debugging print statements tree | commitdiff
2013-12-17 Diane TroutUpdate WSGI_APPLICATION to point to the updated locatio... tree | commitdiff
2013-12-17 Diane TroutInventory works, even though its was hidden between... tree | commitdiff
2013-12-17 Diane Troutmove an example result directory into git and use it... tree | commitdiff
2013-12-17 Diane TroutMerge branch 'django1.4' tree | commitdiff
2013-12-17 Diane TroutStart simplyfing settings by using from settings_local... tree | commitdiff
2013-12-17 Diane Troutadd new wsgi.py driver tree | commitdiff
2013-12-17 Diane TroutUpdate templates to consistently use {% static %} inste... tree | commitdiff
2013-12-17 Diane TroutMove loading DTD into a function as the call caused... tree | commitdiff
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htsworkflow sequencing LIMS software