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Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
[htsworkflow.git]
/
htsworkflow
/
2011-07-07
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-07-06
Diane Trout
Add some additional logging to util/rdflib.py to help...
tree
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commitdiff
2011-07-01
Diane Trout
Make sure that the lane set is sorted on the flowcell...
tree
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commitdiff
2011-06-30
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-30
Diane Trout
Older librdf gets cranky when mixing unicode & strings
tree
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commitdiff
2011-06-30
Diane Trout
Django 1.1 doesn't support validators so remove it...
tree
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commitdiff
2011-06-30
Diane Trout
Fix typo in a template
tree
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commitdiff
2011-06-30
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-29
Diane Trout
Further clean up ddf generation.
tree
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commitdiff
2011-06-28
Diane Trout
Start supporting multiple libraries per lane, as needed...
tree
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commitdiff
2011-06-23
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-22
Diane Trout
Slightly alter some tests to work with versions of...
tree
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commitdiff
2011-06-22
Diane Trout
Move parse_flowcell_id out of frontend.samples.results
tree
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commitdiff
2011-06-21
Diane Trout
Finish new RDF based ddf construction.
tree
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commitdiff
2011-06-18
Diane Trout
Rework ucsc gather to use RDF models for gathering...
tree
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commitdiff
2011-06-18
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-18
Diane Trout
Include the library_id in addition to the RDFa library uri
tree
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commitdiff
2011-06-17
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-17
Diane Trout
Minor RDFa fixes.
tree
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commitdiff
2011-06-15
Diane Trout
Start to move all the RDF namespace definitions into...
tree
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commitdiff
2011-06-15
Diane Trout
Add module to parse UCSC DAF file.
tree
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commitdiff
2011-06-15
Diane Trout
Move code to make srf and qseq to fastq condor scripts...
tree
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commitdiff
2011-06-15
Diane Trout
Sample Test RDFA needed the flowcell id field
tree
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commitdiff
2011-06-15
Diane Trout
Remove some uneeded linefeeds
tree
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commitdiff
2011-06-14
Diane Trout
Fix a template typo
tree
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commitdiff
2011-06-13
Diane Trout
Supprose IVC plot table rows if we don't have data...
tree
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commitdiff
2011-06-13
Diane Trout
Follow the flowcell link from the library page.
tree
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commitdiff
2011-06-13
Diane Trout
The get_permanent_link function on the flowcell model...
tree
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commitdiff
2011-06-13
Diane Trout
Remove some now unnecessary coments and reformat some...
tree
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commitdiff
2011-06-11
Diane Trout
python's 2.6 uuid function doesn't cast to a string...
tree
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commitdiff
2011-06-11
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-06-11
Diane Trout
Convert Rami's DataRun feature to something useful...
tree
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commitdiff
2011-06-10
Brandon W. King
The srf/qseq --raw-format patch.
tree
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commitdiff
2011-06-09
Diane Trout
Move test srf files to testdata directory so I can...
tree
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commitdiff
2011-06-09
Diane Trout
Add a method to return the runfolder name.
tree
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commitdiff
2011-05-27
Diane Trout
Add in test code to verify RDF data being added to...
tree
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commitdiff
2011-05-27
Diane Trout
Trivial change, add human to common name of "homo sapiens"
tree
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commitdiff
2011-05-26
Lorian Schaeffer
Add feature to manage and print labels.
tree
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commitdiff
2011-05-26
Diane Trout
Merge branch 'add-condition'
tree
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commitdiff
2011-05-25
Diane Trout
Make antibody & condition visible.
add-condition
tree
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commitdiff
2011-05-16
Diane Trout
Pretty print the json files to help debugging
tree
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commitdiff
2011-05-16
Diane Trout
Allow configuring additional database settings so we...
tree
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commitdiff
2011-05-09
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-05-09
Diane Trout
Keep moving settings around until I can find a place...
tree
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commitdiff
2011-05-09
Diane Trout
Report missing directory names to help diagnose sequenc...
tree
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commitdiff
2011-05-09
Diane Trout
Validate fastq files in both phred33 & phred64 versions
tree
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commitdiff
2011-05-06
Diane Trout
Make a slightly less confusing 404 error message
0.5.1
tree
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commitdiff
2011-04-18
Diane Trout
Be more flexible with fastq filenames.
tree
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commitdiff
2011-04-06
Diane Trout
django-nose didn't work with django 1.1, so I went...
tree
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commitdiff
2011-04-05
Diane Trout
Adjust django driver script to test the whole package.
tree
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commitdiff
2011-04-05
Diane Trout
Revert a bad change. Apparently past me knew what I...
tree
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commitdiff
2011-04-05
Diane Trout
remove spurious debugging print
tree
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commitdiff
2011-04-02
Diane Trout
Remove spurious debug print statements
tree
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commitdiff
2011-04-02
Diane Trout
Fix a typo inserted into the template.
tree
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commitdiff
2011-04-02
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-04-02
Diane Trout
Add pages to show information about a particular flowcell.
tree
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commitdiff
2011-03-09
Diane Trout
Update spoolwatcher to 0.2 benderjab's logging api
tree
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commitdiff
2011-03-07
Diane Trout
Move some common runfolder path management code into...
tree
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commitdiff
2011-03-07
Diane Trout
Add a place for "breadcrumbs" back into the base.html...
tree
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commitdiff
2011-02-17
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-02-17
Diane Trout
Major updateds to encode_find for extracting encode...
tree
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commitdiff
2011-02-17
Diane Trout
Only use one name for dates on the page.
tree
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commitdiff
2011-02-17
Diane Trout
Minor RDFa cleanups
tree
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commitdiff
2011-02-17
Diane Trout
Change default font size to 14pt
tree
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commitdiff
2011-02-17
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-02-17
Diane Trout
Add RDFa data to our library pages.
tree
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commitdiff
2011-02-17
Diane Trout
Add a small comment defining "results_dir"
tree
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commitdiff
2011-02-15
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-02-07
Diane Trout
Add in a little bit of qseq2fastq testing code. More...
tree
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commitdiff
2011-02-07
Diane Trout
Add documentation about which Phred format we're generating
tree
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commitdiff
2011-02-03
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-02-03
Diane Trout
First cycle can be 2 digit.
tree
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commitdiff
2011-01-25
Diane Trout
Fix typo in a function name.
tree
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commitdiff
2011-01-25
Diane Trout
Add in 12x / 18x PCR protocol end points from Lorian
tree
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commitdiff
2011-01-25
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-01-25
root
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2011-01-21
Diane Trout
Merge branch 'master' of gitosis@mus.cacr.caltech.edu...
tree
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commitdiff
2011-01-14
root
Make replicate field visable on the public page.
tree
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commitdiff
2011-01-08
Diane Trout
Add validation script
0.5.0
tree
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commitdiff
2010-12-02
Diane Trout
Make the inventory login page look a bit nicer.
tree
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commitdiff
2010-12-02
Diane Trout
Adjust some whitespace
tree
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commitdiff
2010-12-01
Diane Trout
This mildly adjusts the css to be a bit prettier
tree
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commitdiff
2010-12-01
Diane Trout
Add a new ini-file option to point to the flowcell...
tree
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commitdiff
2010-11-30
Diane Trout
Add config option notification_bcc for always attaching...
tree
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commitdiff
2010-11-07
Diane Trout
Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow
tree
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commitdiff
2010-11-07
Diane Trout
Very basic non-ExtJS version of the inventory page
tree
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commitdiff
2010-11-07
Diane Trout
Remove another ExtJS panel reference.
tree
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commitdiff
2010-11-01
Diane Trout
Only complane about missing genomes if we _wanted_...
tree
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commitdiff
2010-11-01
Diane Trout
Check for s_${lane}_02_matrix.txt as well as s_${lane...
tree
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commitdiff
2010-10-28
Diane Trout
Remove dependency on ExtJS for library & lanes_for...
tree
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commitdiff
2010-10-27
Diane Trout
The WITH_SEQUENCE flag needs to be lower-case "true".
tree
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commitdiff
2010-10-22
Diane Trout
Report version number derived from git tag.
tree
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commitdiff
2010-10-19
Diane Trout
Set WITH_SEQUENCE as both a per-lane AND global parameter
0.4.5
tree
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commitdiff
2010-10-08
Diane Trout
WITH_SEQUENCE is actually a global GERALD option, remov...
tree
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commitdiff
2010-10-07
Diane Trout
Update gerald config file generation.
tree
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commitdiff
2010-10-05
Lorian Schaeffer
Minor changes to display
tree
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commitdiff
2010-10-01
Lorian Schaeffer
Removed some models from the admin index view
tree
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commitdiff
2010-10-01
Lorian Schaeffer
Changed Frequently Used links to be properly relative
tree
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commitdiff
2010-10-01
Lorian Schaeffer
Removed from admin index page
tree
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commitdiff
2010-10-01
Lorian Schaeffer
Removed unused DataRun model from admin index page
tree
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