woldlab.caltech.edu Git - htsworkflow.git/search

2015-03-27	Diane Trout	store flowcell name in the triple store if its known	commit \| commitdiff \| tree
2015-03-27	Diane Trout	record file size information for a file in the triple...	commit \| commitdiff \| tree
2015-03-27	Diane Trout	Adjust logging overrides and move django.setup to after...	commit \| commitdiff \| tree
2015-03-27	Diane Trout	getitem should only return the key	commit \| commitdiff \| tree
2015-03-27	Diane Trout	clean up a bit of whitespace	commit \| commitdiff \| tree
2015-01-26	Diane Trout	remove unused code	commit \| commitdiff \| tree
2015-01-21	Diane Trout	Update test_retrieve_config to work with factories	commit \| commitdiff \| tree
2015-01-14	Diane Trout	fix spelling error in module name	commit \| commitdiff \| tree
2015-01-13	Diane Trout	Don't pass null authentication information to ENCODED.	commit \| commitdiff \| tree
2015-01-13	Diane Trout	use absolute_import and print_function	commit \| commitdiff \| tree
2015-01-13	Diane Trout	Update inventory tests to use factory boy.	commit \| commitdiff \| tree
2015-01-12	Diane Trout	move the file type test cases out into their own module	commit \| commitdiff \| tree
2015-01-12	Diane Trout	use migrations for experiments, and use migrations...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	get_schema_url only works on object types now, so change...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	at some point I added code that used base64, hashlib...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	Forgot to disable loading ClusterStation and Sequencer...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	Convert experiments modules to use factories instead...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	Improve samples_factory generated objects.	commit \| commitdiff \| tree
2015-01-10	Diane Trout	unimportant whitespace changes, at least the lines...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	whitespace changes	commit \| commitdiff \| tree
2015-01-10	Diane Trout	fix typo -- or at least make it consistent. antigen...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	move cluster station and sequencer tests out into their...	commit \| commitdiff \| tree
2015-01-10	Diane Trout	Use logger instead of trying to print to stdout. especially...	commit \| commitdiff \| tree
2015-01-09	Diane Trout	one should only return json objects. so put our arrays...	commit \| commitdiff \| tree
2014-12-13	Diane Trout	Merge branch 'django1.7' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2014-12-13	Diane Trout	Add document registration class.	commit \| commitdiff \| tree
2014-12-13	Diane Trout	add more type checking for parsing object type from...	commit \| commitdiff \| tree
2014-12-13	Diane Trout	add some helpful log messages	commit \| commitdiff \| tree
2014-12-01	Diane Trout	add ability to adjust some log level messages	commit \| commitdiff \| tree
2014-12-01	Diane Trout	commit script to copy jumpgate sqlite database to felcat...	commit \| commitdiff \| tree
2014-12-01	Diane Trout	require django 1.7 and factory boy for newer test code	commit \| commitdiff \| tree
2014-11-07	Diane Trout	Add some code to help read metadata out of spreadsheets.	commit \| commitdiff \| tree
2014-11-03	Diane Trout	forgot to change one test to use factory	commit \| commitdiff \| tree
2014-11-01	Diane Trout	The makemigrations code didn't like how I was setting...	commit \| commitdiff \| tree
2014-11-01	Diane Trout	name get_query_set was deprecated in favor of get_queryset	commit \| commitdiff \| tree
2014-11-01	Diane Trout	Convert samples app to use migrations.	commit \| commitdiff \| tree
2014-10-29	Diane Trout	Merge branch 'django1.7' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2014-10-29	Diane Trout	actually don't track the sqlite3 database	commit \| commitdiff \| tree
2014-10-27	Diane Trout	comment out benderjab dependency, as were not using...	commit \| commitdiff \| tree
2014-10-27	Diane Trout	Change the settings default to work with the two scoops...	commit \| commitdiff \| tree
2014-10-23	Diane Trout	import os, so we can use os.path.join	commit \| commitdiff \| tree
2014-09-24	Diane Trout	relax requirements to make it easier to install on...	commit \| commitdiff \| tree
2014-09-12	Diane Trout	make it easier to override variables in ENCODED class	commit \| commitdiff \| tree
2014-07-28	Diane Trout	add frozen package list	commit \| commitdiff \| tree
2014-07-26	Diane Trout	configure a mock keyring	commit \| commitdiff \| tree
2014-07-25	Diane Trout	make whitespace pep8 complient	commit \| commitdiff \| tree
2014-07-25	Diane Trout	Use two-scoop style multiple settings file.	commit \| commitdiff \| tree
2014-07-24	Diane Trout	DCC example code sets both content-type and accept...	commit \| commitdiff \| tree
2014-07-24	Diane Trout	pep8 whitespace cleanup.	commit \| commitdiff \| tree
2014-07-24	Diane Trout	create exception using modern python syntax	commit \| commitdiff \| tree
2014-07-24	Diane Trout	remove a commented out import	commit \| commitdiff \| tree
2014-07-24	Diane Trout	Flatten project hierarchy, moving djano applications...	commit \| commitdiff \| tree
2014-06-23	Diane Trout	whitespace cleanup	commit \| commitdiff \| tree
2014-06-23	Diane Trout	clean up for pep8 compliance.	commit \| commitdiff \| tree
2014-06-23	Diane Trout	code cleanup, remove commented out code and adjust...	commit \| commitdiff \| tree
2014-06-23	Diane Trout	Attempt to split common initial data from wold lab...	commit \| commitdiff \| tree
2014-06-23	Diane Trout	Remove very old misplaced initial data fixtures	commit \| commitdiff \| tree
2014-06-19	Diane Trout	Add fields list to a few ModelForms Meta class.	commit \| commitdiff \| tree
2014-06-19	Diane Trout	Rename get_query_set to get_queryset	commit \| commitdiff \| tree
2014-06-19	Diane Trout	Rename HttpResponse parameter mimetype to content_type	commit \| commitdiff \| tree
2014-06-19	Diane Trout	remove file created by typoing file name	commit \| commitdiff \| tree
2014-06-19	Diane Trout	Change unittest2 back into unittest.	commit \| commitdiff \| tree
2014-06-19	Diane Trout	Explicitly list initial_data.json for the test data...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Add post_json as some DCC objects are created with...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Rename headers to json_headers for requests (seemed...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Updates to jsonld context for the DCC schemas.	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Update test_encoded test cases due to https now being...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	DCC switched to https	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Update fastqname code & test code to better support...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Directly generate compressed fastq files from HiSeq...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	the filename templates were moved from condorfastq...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Indicate when desplit_fastq didn't get any files to...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Make sure we can load a run file that lacks alignment...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	For some reason the previous integrety fixes, added...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Postgresql has referential integrety checking.	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Ignore the path when comparing filenames from the md5...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	use autoopen to access fastq files	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Start implementing tool to compute library fastq quality	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Just use the python 2 url parsers instead of trying...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Update timestamps in inventory app test data to be...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	point default flowcell directory to test data	commit \| commitdiff \| tree
2014-06-10	Diane Trout	add default values for some application specific values	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Configure default STATICFILES_DIRS for static files...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Mathematica had a suggestion for a fastq mime type...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Regex pattern was wrong.	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Convert more timestamps to include timezone	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2014-02-18	Diane Trout	Add option to compress fastq file	commit \| commitdiff \| tree
2014-02-12	Diane Trout	Allow arbitrarily long regexes in experiment.FileType...	commit \| commitdiff \| tree
2014-01-22	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2014-01-22	Diane Trout	pass filters a string not an undefined variable	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Remove django test environment setup code.	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Use SkipIf to skip copier tests if benderjab isn't...	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Convert timestamps from the runfolder file to a timezone...	commit \| commitdiff \| tree
2014-01-17	Diane Trout	django provides django.utils.timezone.now to return...	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Set default timezone to where our lab is located	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Update test data dates to have timezone information	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Fix test to use newer django database dictionary instead...	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Re-add default email addresses for email notification...	commit \| commitdiff \| tree
2014-01-17	Diane Trout	Implement a encoded search to json-ld wrapper.	commit \| commitdiff \| tree
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