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[htsworkflow.git] / htswanalysis / scripts /
drwxr-xr-x   ..
-rwxr-xr-x 185 CleanWig.pm
-rwxr-xr-x 1326 CollectLibraries.pm
-rwxr-xr-x 18873 ConfigureTasks.pm
-rw-r--r-- 2618 Flowcell_QC_Makefile
-rw-r--r-- 2068 LibrariesMakefile
-rwxr-xr-x 218 MACS_2_BED.sh
-rwxr-xr-x 3754 MACS_2_broadPeak.pm
-rwxr-xr-x 1374 QC_Summarize_qPCR.pm
-rwxr-xr-x 4402 QuEST_2_BED.pm
-rwxr-xr-x 4123 QuEST_2_narrowPeak.pm
-rw-r--r-- 719 README
-rwxr-xr-x 2118 RecompileLibraries.pm
-rwxr-xr-x 3727 SummarizeLibrary.pm
-rwxr-xr-x 1433 SummarizeMACS.pm
-rwxr-xr-x 12341 SummarizeProject2.pm
-rwxr-xr-x 2960 SummarizeQuEST.pm
-rwxr-xr-x 786 SummarizeWingPeaks.pm
-rwxr-xr-x 2875 Summarize_Methylseq.pm
-rwxr-xr-x 1249 Summarize_qPCR.pm
-rwxr-xr-x 4051 WriteQCSummary.pm
-rwxr-xr-x 1724 align2TagAlign.pm
-rwxr-xr-x 470 align_to_bed.pm
-rwxr-xr-x 1582 analys_track_comm.py
-rwxr-xr-x 1250 analys_track_main.py
-rwxr-xr-x 119 bed_quest.sh
-rwxr-xr-x 1056 count_bases.pm
-rwxr-xr-x 676 count_reads.pm
-rwxr-xr-x 862 extract_peaks.pm
-rwxr-xr-x 1464 extract_regions.pm
-rwxr-xr-x 224 flatten_fasta.pm
-rwxr-xr-x 6144 primer_design.pm
-rwxr-xr-x 5375 profile_to_svg.pm
-rwxr-xr-x 88 tabify_quest.sh