Move alphabet type into SeqString
[mussa.git] / alg / CMakeLists.txt
1 FIND_PACKAGE(OpenGL )
2 FIND_PACKAGE(Boost REQUIRED)
3 FIND_PACKAGE(Qt4)
4 INCLUDE( ${QT_USE_FILE} )
5 INCLUDE( Platform )
6
7 SET(MOC_HEADERS
8             mussa.hpp
9             nway_paths.hpp
10    )
11 QT4_WRAP_CPP(MOC_SOURCES ${MOC_HEADERS})
12
13 SET(SOURCES alphabet.cpp
14             annotation_colors.cpp 
15             color.cpp 
16             conserved_path.cpp 
17             flp.cpp 
18             flp_seqcomp.cpp 
19             glseqbrowser.cpp 
20             glsequence.cpp 
21             mussa.cpp 
22             motif_parser.cpp 
23             nway_entropy.cpp
24             nway_other.cpp 
25             nway_paths.cpp
26             parse_options.cpp 
27             seq.cpp
28             seq_span.cpp
29             sequence.cpp
30             sequence_location.cpp )
31
32 GET_MUSSA_COMPILE_FLAGS(ALG_CFLAGS)
33 GET_MUSSA_LINK_FLAGS(ALG_LDFLAGS)
34 SET_SOURCE_FILES_PROPERTIES(
35   ${SOURCES} ${MOC_SOURCES}
36   PROPERTIES
37   COMPILE_FLAGS "${ALG_CFLAGS}"
38 )
39
40 ADD_LIBRARY( mussa_core STATIC ${SOURCES} ${MOC_SOURCES})
41 INCLUDE_DIRECTORIES(${OPENGL_INCLUDE_DIR}
42                     ${BOOST_INCLUDE_DIR}
43                     ${QT_INCLUDES}
44                     ${CMAKE_CURRENT_SOURCE_DIR})
45
46 SET_TARGET_PROPERTIES(
47   mussa_core PROPERTIES
48     COMPILE_FLAGS "${ALG_CFLAGS}"
49     LINK_FLAGS "${ALG_LDFLAGS}"
50 )
51 ADD_SUBDIRECTORY( test )
52 ADD_SUBDIRECTORY( tsf )