fix ticket:83 throw an error when we don't have a fasta file
[mussa.git] / examples / mck3test_example.museq
1 <Mussa_Sequence>
2 <Sequence>
3 CCATCCTGGTCTATAGAGAGAGTTCCAGAACAGCCAGGGCTACAGATAAACCCATCTGGAAAAACAAAGTTGAATGACCCAAGAGGGGTTCTCAGAGGGTGGCGTGTGCTCCCTGGCAAGCCTATGACATGGCCGGGGCCTGCCTCTCTCTGCCTCTGACCCTCAGTGGCTCCCATGAACTCCTTGCCCAATGGCATCTTTTTCCTGCGCTCCTTGGGTTATTCCAGTCTCCCCTCAGCATTCCTTCCTCAGGGCCTCGCTCTTCTCTCTGCTCCCTCCTTGCACAGCTGGCTCTGTCCACCTCAGATGTCACAGTGCTCTCTCAGAGGAGGAAGGCACCATGTACCCTCTGTTTCCCAGGTAAGGGTTCAATTTTTAAAAATGGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAAGACAGGGCTCCTCTGTGTAGTCCTAACTGTCTTGAAACTCCCTCTGTAGACCAGGTCGACCTCGAACTCTTGAAACCTGCCACGGACCACCCAGTCAGGTATGGAGGTCCCTGGAATGAGCGTCCTCGAAGCTAGGTGGGTAAGGGTTCGGCGGTGACAAACAGAAACAAACACAGAGGCAGTTTGAATCTGAGTGTATTTTGCAGCTCTCAAGCAGGGGATTTTATACATAAAAAAAAAAAAAAAAAAAAAACCAAACATTACATCTCTTAGAAACTATATCCAATGAAACAATCACAGATACCAACCAAAACCATTGGGCAGAGTAAAGCACAAAAATCATCCAAGCATTACAACTCTGAAACCATGTATTCAGTGAATCACAAACAGAACAGGTAACATCATTATTAATATAAATCACCAAAATATAACAATTCTAAAAGGATGTATCCAGTGGGGGCTGTCGTCCAAGGCTAGTGGCAGATTTCCAGGAGCAGGTTAGTAAATCTTAACCACTGAACTAACTCTCCAGCCCCATGGTCAATTATTATTTAGCATCTAGTGCCTAATTTTTTTTTATAAATCTTCACTATGTAATTTAAAACTATTTTAATTCTTCCTAATTAAGGCTTTCTTTACCATATACCAAAATTCACCTCCAATGACACACGCGTAGCCATATGAAATTTTATTGTTGGGAAAATTTGTACCTATCATAATAGTTTTGTAAATGATTTAAAAAGCAAAGTGTTAGCCGGGCGTGGTGGCACACGCCTTTAATCCCTGCACTCGGGAGGCAGGGGCAGGAGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAACCCCCCACCCCCCAAAAAAAGCAAAGTGTTGGTTTCCTTGGGGATAAAGTCATGTTAGTGGCCCATCTCTAGGCCCATCTCACCCATTATTCTCGCTTAAGATCTTGGCCTAGGCTACCAGGAACATGTAAATAAGAAAAGGAATAAGAGAAAACAAAACAGAGAGATTGCCATGAGAACTACGGCTCAATATTTTTTCTCTCCGGCGAAGAGTTCCACAACCATCTCCAGGAGGCCTCCACGTTTTGAGGTCAATGGCCTCAGTCTGTGGAACTTGTCACACAGATCTTACTGGAGGTGGTGTGGCAGAAACCCATTCCTTTTAGTGTCTTGGGCTAAAAGTAAAAGGCCCAGAGGAGGCCTTTGCTCATCTGACCATGCTGACAAGGAACACGGGTGCCAGGACAGAGGCTGGACCCCAGGAACACCTTAAACACTTCTTCCCTTCTCCGCCCCCTAGAGCAGGCTCCCCTCACCAGCCTGGGCAGAAATGGGGGAAGATGGAGTGAAGCCATACTGGCTACTCCAGAATCAACAGAGGGAGCCGGGGGCAATACTGGAGAAGCTGGTCTCCCCCCAGGGGCAATCCTGGCACCTCCCAGGCAGAAGAGGAAACTTCCACAGTGCATCTCACTTCCATGAATCCCCTCCTCGGACTCTGAGGTCCTTGGTCACAGCTGAGGTGCAAAAGGCTCCTGTCATATTGTGTCCTGCTCTGGTCTGCCTTCCACAGCTTGGGGGCCACCTAGCCCACCTCTCCCTAGGGATGAGAGCAGCCACTACGGGTCTAGGCTGCCCATGTAAGGAGGCAAGGCCTGGGGACACCCGAGATGCCTGGTTATAATTAACCCAGACATGTGGCTGCCCCCCCCCCCCCAACACCTGCTGCCTGAGCCTCACCCCCACCCCGGTGCCTGGGTCTTAGGCTCTGTACACCATGGAGGAGAAGCTCGCTCTAAAAATAACCCTGTCCCTGGTGGATCCAGGGTGAGGGGCAGGCTGAGGGCGGCCACTTCCCTCAGCCGCAGGTTTGTTTTCCCAAGAATGGTTTTTCTGCTTCTGTAGCTTTTCCTGTCAATTCTGCCATGGTGGAGCAGCCTGCACTGGGCTTCTGGGAGAAACCAAACCGGGTTCTAACCTTTCAGCTACAGTTATTGCCTTTCCTGTAGATGGGCGACTACAGCCCCACCCCCACCCCCGTCTCCTGTATCCTTCCTGGGCCTGGGGATCCTAGGCTTTCACTGGAAATTTCCCCCCAGGTGCTGTAGGCTAGAGTCACGGCTCCCAAGAACAGTGCTTGCCTGGCATGCATGGTTCTGAACCTCCAACTGCAAAAAATGACACATACCTTGACCCTTGGAAGGCTGAGGCAGGGGGATTGCCATGAGTGCAAAGCCAGACTGGGTGGCATAGTTAGACCCTGTCTCAAAAAACCAAAAACAATTAAATAACTAAAGTCAGGCAAGTAATCCTACTCGGGAGACTGAGGCAGAGGGATTGTTACATGTCTGAGGCCAGCCTGGACTACATAGGGTTTCAGGCTAGCCCTGTCTACAGAGTAAGGCCCTATTTCAAAAACACAAACAAAATGGTTCTCCCAGCTGCTAATGCTCACCAGGCAATGAAGCCTGGTGAGCATTAGCAATGAAGGCAATGAAGGAGGGTGCTGGCTACAATCAAGGCTGTGGGGGACTGAGGGCAGGCTGTAACAGGCTTGGGGGCCAGGGCTTATACGTGCCTGGGACTCCCAAAGTATTACTGTTCCATGTTCCCGGCGAAGGGCCAGCTGTCCCCCGCCAGCTAGACTCAGCACTTAGTTTAGGAACCAGTGAGCAAGTCAGCCCTTGGGGCAGCCCATACAAGGCCATGGGGCTGGGCAAGCTGCACGCCTGGGTCCGGGGTGGGCACGGTGCCCGGGCAACGAGCTGAAAGCTCATCTGCTCTCAGGGGCCCCTCCCTGGGGACAGCCCCTCCTGGCTAGTCACACCCTGTAGGCTCCTCTATATAACCCAGGGGCACAGGGGCTGCCCCCGGGTCAC
4 </Sequence>
5 <Annotations>
6 300 600 Glorp Glorptype
7 </Annotations>
8 <Sequence>
9 GGATCCTTCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACCTGGCCTATTACCCTTCTCAGGCTCTGGAGTCCATCCTTCTGCTCTGTCTCCCTCAGTTCAATTGTTTTTTGTTTTTTGTTTTTTTTTTAGACACAGTCTCGCTCTGTCACCAAGGCTGGAGTGCAGCAGTGCGATCACAGCTCACCGCAGCCTCACCTCCCAGGCTCAAGTGATCCTCCCATCTCGGCCTCTGAGTAGCTGAGACTATAGGTGTGTCCACATGTCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGCGTTGGCCAGGGTGGTCTTGAACTCCTGAGCTCAAGCAATCCTCCTGCCTCAGCCTCCTTGTTTTGATTTTTAGATCCCACAAATAACTTGTGATGTTTGTCTTTCTATACCTGGTTCATTTAACATTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGTGAGACTGAGTCTTGCTCTGTCACTCAGGCTGGAGGGCAATGGTGCATCTCAGCTCACTGCAACCTCCACCTCCTAGGTTCAAGCAATTCTTATGCCTCAGCCTCCTGGCTAGCTGGGATTACAGGCGTGTGTCACCATGCCAGGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGGCCTCAAGTGATCCACCCGCCTCCGCCTCTGCCTCCCAAAGTGCTGGGATTACGGGCCTGAGCCACTGTGCCCGGCCCATCTAACATTTTCACTGTCAATCACAATGGGATTAAAACTCCTCCCACAGCCCCTAGGGACCATGGGTCTGCTCCTGTCTCCCCTCCAACCTCATCTTCTTCCTCCCACTCTCTCCTTGGCCCCATCTGCTCCAGTCCCCTGGCCTCCTTCCTGTCTGTCCTCAGATGTGCCCAGCCATTCTCACCTCAGCGCCTTTGCACCTGCTGTTCCCCCCAGAGCCGCACATGGCTGGCTCCCTGTTCTCCTTCAGGTCTCTGCTCAGATGTCATCTTCCCAAAGAGGCCTGCCTCGACCTCCCCTGCTGCTGTGCCGTCCCCTCATCTGTGACCCTCTTGCACTATCACCTCCAGGACGGCGGGGGTTTTGTGTTTTGTTGTAGCCTCAGGAAGTGCCTGATAGATCCCTGTTTCGAGACCAGTTCCATTTGGTTTTCTGGGCCTCAGTTTCCGTAACCGTGAAGGAGACCCTCGGCAATCTGAGCTTGCTGGGAAAGGGCTGGGCCCCATGTAAATATTTCTAAAGCACCCCTCTCCCCTCCCCCCTCAGATCAGGAGTCTGAGGGAGAGGCACAGAGGCTCCCTTTCTCTAAGCCAGTCCTCACCTGCCTAAGAAGATGTGAAGGAGACCCAGGAGACCCTGGGATAGGGAGGAACTCAGAGGGAAGGGACATTCTTTTCTTCGTCGCAATCCTGGGAGCTCCCTGGAGGAGGAGACCCGATCAGCCTGCAATCCTGGCGCGTCCCAGGAGGAGAAAGCGGCTTCCTCTATACTGTACTCTCCTCCACAGAACCCCCCTCTCAGCCCTGGAAGTCCTTGCTCACAGCCGAGGCGCCGAGAGCGCTTGCTCTGCCCAGATCTCGGCGAGTCTGCGCCCGCGCTCTGAACGGCGTCGCTGCCCAGCCCCCTTCCCCGGGAGGTGGGAGCGGCCACCCAGGGCCCCGTGGCTGCCCTTGTAAGGAGGCGAGGCCGAGGACACCCGAGACGCCCGGTTATAATTAACCAGGACACGTGGCGAACCCCCCTCCAACACCTGCCCCCGAACCCCCCCATACCCAGCGCCTCGGGTCTCGGCCTTTGCGGCAGAGGAGACAGCAAAGCGCCCTCTAAAAATAACTCCTTTCCCGGCGACCGAGACCCTCCCTGTCCCCGCACAGCGAAATCTCCCAGTGGCACCGAGGGGGCGAGGGTTAAGTGGGGGGGAGGGTGACCACCGCCTCCCACCCTTGCCCTGAGTTTGAATCTCTCCAACTCAGCCAGCCTCAGTTTCCCCTCCACTCAGTCCCTAGGAGGAAGGGGCGCCCAAGCGGGTTTCTGGGGTTAGACTGCCCTCCATTGCAATTGGTCCTTCTCCCGGCCTCTGCTTCCTCCAGCTCACAGGGTATCTGCTCCTCCTGGAGCCACACCTTGGTTCCCCGAGGTGCCGCTGGGACTCGGGTAGGGGTGAGGGCCCAGGGGCGACAGGGGGAGCCGAGGGCCACAGGAAGGGCTGGTGGCTGAAGGAGACTCAGGGGCCAGGGGACGGTGGCTTCTACGTGCTTGGGACGTTCCCAGCCACCGTCCCATGTTCCCGGCGGGGGCCAGCTGTCCCCACCGCCAGCCCAACTCAGCACTTGGTTAGGGTATCAGCTTGGTGGGGGCGTGAGCCCAGCCCTGGGGCGCTCAGCCCATACAAGGCCATGGGGCTGGGCGCAAAGCATGCCTGGGTTCAGGGTGGGTATGGTGCCGGAGCAGGGAGGTGAGAGGCTCAGCTGCCCTCCAGAACTCCTCCCTGGGGACAACCCCTCCCAGCCAATAGCACAGCCTAGGTCCCCCTATATAAGGCCACGGCTGCTGGCCCTTCCTTTGGGTCAGTGTCACCTCCAGGATACAGACAGCCCCCCTTCAGCCCAGCCCAGCCAGGTACTGCACGGGGCGGGAATCTGGGTGGGGGCCAGAGTAGGGGATTTCTGTGGGTGCTAGAGGCTTGGCTTGGGAAAGGGTCTGTGTGTCACCCCTTGCTCCACCAACATCCTCCTATACAAAGGCAGGTCGGTGCGTGGGAAGGTTGACCCTTGTGTGTCTGGGAGGCCCCTCCATCTGTGAGGCTGCCTGAACCCCCACTGGGACCTGTGATTTCTGCGGCACAG
10 </Sequence>
11 <Annotations>
12 300 600 Glorp Glorptype
13 </Annotations>
14 <Sequence>
15 CTCCCTGAGGGGAGTGCCCCGCTTAGCCCTCAGCCCTGGCACCCACCAGGCAGAGGAGGCAGCTCCCAGAGTCCCCGGCTGAGGGGGCCTGCCCATGTCCTCGCGAGTCGGGCACCCAGTCCCCTTCCCTGGGGGCCTCGGGTGCCTTGTAAGGAGGCAAGGCCCAGGACACCCGAGCTGCCGGCTATAATTAGCCTGGACACGTGGGCCCCCCGCCAGCACCTGCCCTGAGCCCCCCTACCCGCAGCCTTGGGTGCTGGGACTGCCGACAGCAGAGACCGCTCTAAAAATAGCTCCCTTCCTGGACGGCCCCTCCCAGCAGGCCCCCCACCCCCCGCTGAGGCTCACTGCTGGTGTCCCTGCCTGGTGCTCCCTAGGGTGTGCACCCACGGCAGGTGCAGAGGCAGGGGGCACCGCGGGGGGCTGGTAACAGCAGCAGGCCTAGGGGCCAGGGGACGGCGAGCTGTACGTGCCAGGACACCCCCAGCCACTGTCCCGTGCTCCCGGCGGGGGCCAGCTGTCCCCCGCCAGCCCGACTCAGCACTTGCTCTGCACATCGGCCTGGGGCGGCCCATACAAGGGCATGGGGCTGGGCACAAGGCACGCCCGCGTCCAGGTGGGCACTGTGCCCGGGCATGGTGGGGGGAGAGGCTGGGCTGCCTTCCAGGCCCCCTCCCTGGGGCCAGCCCCGCCCAGCCAGTGGCACAGCAGGGTCCCCTACATAAAGCCGGGGCCGCGGGCCCTGGATCTGCCTCAGTGTCGCCTGCAGGACACACGTAGCCCCGCTCAGCACAGCCCAGCCAG
16 </Sequence>
17 <Annotations>
18 300 600 Glorp Glorptype
19 </Annotations>
20 </Mussa_Sequence>