py/CMakeLists.txt

   1 FIND_PACKAGE(Boost 1.34.1 COMPONENTS python filesystem serialization)
   2 FIND_PACKAGE(OpenGL)
   3 FIND_PACKAGE(PythonLibs)
   4 FIND_PACKAGE(PythonInterp)
   5 # SET(QT_DONT_USE_QTGUI 1)
   6 FIND_PACKAGE(Qt4)
   7 INCLUDE( ${QT_USE_FILE} )
   8
   9
  10 IF(Boost_PYTHON_LIBRARY)
  11   INCLUDE_DIRECTORIES(${PYTHON_INCLUDE_PATH} ${QT_INCLUDES})
  12   SET(SOURCES
  13         stl_container_adapter.cpp
  14         alphabet.cpp
  15         annot.cpp
  16         annotation_colors.cpp
  17         annotations.cpp
  18         conserved_path.cpp
  19         drawable.cpp
  20         flp.cpp
  21         glsequence.cpp
  22         module.cpp
  23         mussa.cpp
  24         nway_paths.cpp
  25         seq_span.cpp
  26         sequence.cpp
  27         )
  28   SET(QUI_SOURCES
  29     module_qui.cpp
  30     qt.cpp
  31     sequence.cpp
  32     glsequence.cpp
  33     annotation_colors.cpp
  34     sequencebrowserwidget.cpp
  35   )
  36   SET(MUSSA_LIBRARIES
  37         mussa_core
  38         ${Boost_PYTHON_LIBRARY}
  39         ${Boost_FILESYSTEM_LIBRARY}
  40         ${Boost_SERIALIZATION_LIBRARY}
  41         ${OPENGL_gl_LIBRARY}
  42         ${QT_QTCORE_LIBRARY}
  43         #optimized ${QT_QTCORE_LIBRARY_RELEASE}
  44         #debug ${QT_QTCORE_LIBRARY_DEBUG}
  45      )
  46   GET_MUSSA_COMPILE_FLAGS(PY_CFLAGS)
  47   GET_MUSSA_LINK_FLAGS(PY_LDFLAGS)
  48
  49         # configure static core python library
  50   ADD_LIBRARY(mussa_py STATIC ${SOURCES})
  51   SET_TARGET_PROPERTIES(mussa_py PROPERTIES
  52                         COMPILE_FLAGS "${PY_CFLAGS}"
  53                         LINK_FLAGS "${PY_LDFLAGS}")
  54
  55   # configure core (shared) python module
  56   ADD_LIBRARY(mussa MODULE ${SOURCES})
  57   SET_TARGET_PROPERTIES(mussa PROPERTIES
  58                         PREFIX ""
  59                         COMPILE_FLAGS "${PY_CFLAGS}"
  60                         LINK_FLAGS "${PY_LDFLAGS}")
  61   TARGET_LINK_LIBRARIES(mussa
  62                         ${MUSSA_LIBRARIES}
  63                         ${PYTHON_LIBRARIES}
  64                         )
  65   # configure static gui python library
  66   #ADD_LIBRARY(mussaqui_py STATIC ${QUI_SOURCES})
  67   #  SET_TARGET_PROPERTIES(mussa_py PROPERTIES
  68   #                        COMPILE_FLAGS "${PY_CFLAGS}"
  69   #                        LINK_FLAGS "${PY_LDFLAGS}")
  70
  71   # configure gui (shared) python library
  72   ADD_LIBRARY(mussaqui MODULE ${QUI_SOURCES})
  73   SET_TARGET_PROPERTIES(mussaqui PROPERTIES
  74                        PREFIX ""
  75                        COMPILE_FLAGS "${PY_CFLAGS}"
  76                        LINK_FLAGS "${PY_LDFLAGS}")
  77   TARGET_LINK_LIBRARIES(mussaqui
  78                         mussa_qui
  79                         ${MUSSA_LIBRARIES}
  80                         ${PYTHON_LIBRARIES}
  81                         ${QT_QTGUI_LIBRARY}
  82                         ${QT_QTOPENGL_LIBRARY}
  83                        )
  84
  85   SET_SOURCE_FILES_PROPERTIES(
  86     ${SOURCES}
  87     ${QUI_SOURCES}
  88     PROPERTIES
  89     COMPILE_FLAGS "${PY_CFLAGS}"
  90   )
  91   SET_TARGET_PROPERTIES(
  92     ${STATIC_PYTHON_TARGETS} ${SHARED_PYTHON_TARGETS}
  93     PROPERTIES
  94     COMPILE_FLAGS "${PY_CFLAGS}"
  95     LINK_FLAGS "${PY_LDFLAGS}"
  96   )
  97
  98   IF(PYTHON_EXECUTABLE)
  99     SET(PYTEST_DIR ${CMAKE_SOURCE_DIR}/py/test/)
 100     ADD_TEST(TestAnnotations
 101                      ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestAnnotations.py)
 102     ADD_TEST(TestSeqSpan ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestSeqSpan.py)
 103     ADD_TEST(TestSequence ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestSequence.py)
 104     ADD_TEST(TestFlp ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestFlp.py)
 105     ADD_TEST(TestMussa ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestMussa.py)
 106   ENDIF(PYTHON_EXECUTABLE)
 107 ELSE(Boost_PYTHON_LIBRARY)
 108   MESSAGE(STATUS "Not building mussa python extension, Boost python not found")
 109 ENDIF(Boost_PYTHON_LIBRARY)
 110
 111 ADD_SUBDIRECTORY(test)