qui/PathWindow.cxx

   1 #include "qui/PathWindow.h"
   2
   3 #include <QAction>
   4 #include <QDir>
   5 #include <QFileDialog>
   6 #include <QIcon>
   7 #include <QMenuBar>
   8 #include <QMessageBox>
   9 #include <QStatusBar>
  10 #include <QString>
  11 #include <QToolBar>
  12
  13 #include "qui/PathScene.h"
  14 #include "qui/ThresholdWidget.h"
  15
  16 #include <iostream>
  17
  18 PathWindow::PathWindow(QWidget *) :
  19   closeAction(0) // initialize one of the pointers to null as a saftey flag
  20 {
  21   setupActions();
  22   setupMainMenu();
  23
  24   scene = new PathScene(10000, 10, this);
  25   setCentralWidget(scene);
  26
  27   mussaViewTB = new QToolBar("Path Views");
  28   mussaViewTB->addAction(toggleMotifsAction);
  29
  30   ThresholdWidget *threshold = new ThresholdWidget;
  31   threshold->setRange(21, 30);
  32   scene->setClipPlane(21);
  33   connect(threshold, SIGNAL(thresholdChanged(int)),
  34           scene, SLOT(setClipPlane(int)));
  35   mussaViewTB->addWidget(threshold);
  36   addToolBar(mussaViewTB);
  37
  38   statusBar()->showMessage("Welcome to mussa", 2000);
  39 }
  40
  41 void PathWindow::setupActions()
  42 {
  43   // we really don't want to run this more than once.
  44   assert (closeAction == 0);
  45
  46   // the ever popular about box
  47   aboutAction = new QAction(tr("&About"), this);
  48   connect(aboutAction, SIGNAL(triggered()), this, SLOT(about()));
  49   aboutAction->setIcon(QIcon("icons/info.png"));
  50
  51   // add exit
  52   closeAction = new QAction(tr("&Close"), this);
  53   closeAction->setStatusTip(tr("Close this window"));
  54   connect(closeAction, SIGNAL(triggered()), this, SLOT(close()));
  55   closeAction->setIcon(QIcon("icons/exit.png"));
  56
  57   createNewAnalysisAction = new QAction(tr("Define Analysis"), this);
  58   connect(createNewAnalysisAction, SIGNAL(triggered()),
  59           this, SLOT(createNewAnalysis()));
  60   createNewAnalysisAction->setIcon(QIcon("icons/filenew.png"));
  61
  62   createSubAnalysisAction = new QAction(tr("Define SubAnalysis"), this);
  63   connect(createSubAnalysisAction, SIGNAL(triggered()),
  64           this, SLOT(createSubAnalysis()));
  65
  66   loadMotifListAction = new QAction(tr("Load Motif List"), this);
  67   connect(loadMotifListAction, SIGNAL(triggered()),
  68           this, SLOT(loadMotifList()));
  69
  70   loadMupaAction = new QAction(tr("Load Mussa Parameters"), this);
  71   connect(loadMupaAction, SIGNAL(triggered()),
  72           this, SLOT(loadMupa()));
  73
  74   loadSavedAnalysisAction = new QAction(tr("Load &Analysis"), this);
  75   connect(loadSavedAnalysisAction, SIGNAL(triggered()),
  76           this, SLOT(loadSavedAnalysis()));
  77   loadSavedAnalysisAction->setIcon(QIcon("icons/fileopen.png"));
  78
  79   saveMotifListAction = new QAction(tr("Save Motifs"), this);
  80   connect(saveMotifListAction, SIGNAL(triggered()),
  81           this, SLOT(saveMotifList()));
  82   saveMotifListAction->setIcon(QIcon("icons/filesave.png"));
  83
  84   showMussaViewToolbarAction = new QAction(tr("Show Toolbar"), this);
  85   connect(showMussaViewToolbarAction, SIGNAL(triggered()),
  86           this, SLOT(showMussaToolbar()));
  87   showMussaViewToolbarAction->setCheckable(true);
  88   showMussaViewToolbarAction->setChecked(true);
  89
  90   toggleMotifsAction = new QAction(tr("Toggle Motifs"), this);
  91   connect(toggleMotifsAction, SIGNAL(triggered()),
  92           this, SLOT(toggleMotifs()));
  93
  94   toggleMotifsAction->setCheckable(true);
  95   toggleMotifsAction->setIcon(QIcon("icons/motif_icon.png"));
  96 }
  97
  98 void PathWindow::setupMainMenu()
  99 {
 100   // we need to run setupActions first
 101   assert (closeAction != 0);
 102
 103   QMenu *newMenu;
 104   newMenu = menuBar()->addMenu(tr("&File"));
 105   newMenu->addAction(createNewAnalysisAction);
 106   newMenu->addAction(loadMupaAction);
 107   newMenu->addAction(loadSavedAnalysisAction);
 108   newMenu->addAction(createSubAnalysisAction);
 109   newMenu->addSeparator();
 110   newMenu->addAction(loadMotifListAction);
 111   newMenu->addAction(saveMotifListAction);
 112   newMenu->addSeparator();
 113   newMenu->addAction(closeAction);
 114
 115   newMenu = menuBar()->addMenu(tr("&View"));
 116   newMenu->addAction(showMussaViewToolbarAction);
 117
 118   newMenu = menuBar()->addMenu(tr("&Help"));
 119   newMenu->addAction(aboutAction);
 120 }
 121
 122 void PathWindow::about()
 123 {
 124   QMessageBox::about(this, tr("About mussa"),
 125       tr("Welcome to Multiple Species Sequence Analysis\n"
 126          "(c) 2005-2006 California Institute of Technology\n"
 127          "Tristan De Buysscher, Diane Trout\n"));
 128 }
 129
 130 void PathWindow::createNewAnalysis()
 131 {
 132   NotImplementedBox();
 133 }
 134
 135 void PathWindow::createSubAnalysis()
 136 {
 137   NotImplementedBox();
 138 }
 139
 140 void PathWindow::loadMotifList()
 141 {
 142   NotImplementedBox();
 143 }
 144
 145 void PathWindow::loadMupa()
 146 {
 147   QString caption("Load a mussa parameter file");
 148   QString filter("Mussa Parameters (*.mupa)");
 149   QString mupa_path = QFileDialog::getOpenFileName(this,
 150                                                    caption,
 151                                                    QDir::currentPath(),
 152                                                    filter);
 153   mussaAnalysis.load_mupa_file(mupa_path.toStdString());
 154 }
 155
 156 void PathWindow::loadSavedAnalysis()
 157 {
 158   NotImplementedBox();
 159 }
 160
 161 void PathWindow::saveMotifList()
 162 {
 163   NotImplementedBox();
 164 }
 165
 166 void PathWindow::showMussaToolbar()
 167 {
 168   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 169   if (mussaViewTB->isVisible())
 170     mussaViewTB->hide();
 171   else
 172     mussaViewTB->show();
 173   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 174 }
 175
 176 void PathWindow::toggleMotifs()
 177 {
 178   NotImplementedBox();
 179 }
 180
 181 void PathWindow::NotImplementedBox()
 182 {
 183   QMessageBox::warning(this, QObject::tr("mussa"), QObject::tr("Not implemented yet"));
 184 }
 185
 186