qui/PathWindow.cxx

   1 #include "qui/PathWindow.h"
   2
   3 #include <QAction>
   4 #include <QDir>
   5 #include <QFileDialog>
   6 #include <QIcon>
   7 #include <QMenuBar>
   8 #include <QMessageBox>
   9 #include <QStatusBar>
  10 #include <QString>
  11 #include <QToolBar>
  12
  13 #include "qui/PathScene.h"
  14 #include "qui/ThresholdWidget.h"
  15
  16 #include <iostream>
  17
  18 PathWindow::PathWindow(QWidget *) :
  19   closeAction(0) // initialize one of the pointers to null as a saftey flag
  20 {
  21   setupActions();
  22   setupMainMenu();
  23
  24   scene = new PathScene(10000, 10, this);
  25   setCentralWidget(scene);
  26
  27   mussaViewTB = new QToolBar("Path Views");
  28   mussaViewTB->addAction(toggleMotifsAction);
  29
  30   ThresholdWidget *threshold = new ThresholdWidget;
  31   threshold->setRange(21, 30);
  32   scene->setClipPlane(21);
  33   connect(threshold, SIGNAL(thresholdChanged(int)),
  34           scene, SLOT(setClipPlane(int)));
  35   mussaViewTB->addWidget(threshold);
  36   addToolBar(mussaViewTB);
  37
  38   statusBar()->showMessage("Welcome to mussa", 2000);
  39 }
  40
  41 void PathWindow::setupActions()
  42 {
  43   // we really don't want to run this more than once.
  44   assert (closeAction == 0);
  45
  46   // the ever popular about box
  47   aboutAction = new QAction(tr("&About"), this);
  48   connect(aboutAction, SIGNAL(triggered()), this, SLOT(about()));
  49
  50   // add exit
  51   closeAction = new QAction(tr("&Close"), this);
  52   closeAction->setStatusTip(tr("Close this window"));
  53   connect(closeAction, SIGNAL(triggered()), this, SLOT(close()));
  54
  55   createNewAnalysisAction = new QAction(tr("Define Analysis"), this);
  56   connect(createNewAnalysisAction, SIGNAL(triggered()),
  57           this, SLOT(createNewAnalysis()));
  58
  59   createSubAnalysisAction = new QAction(tr("Define SubAnalysis"), this);
  60   connect(createSubAnalysisAction, SIGNAL(triggered()),
  61           this, SLOT(createSubAnalysis()));
  62
  63   loadMotifListAction = new QAction(tr("Load Motif List"), this);
  64   connect(loadMotifListAction, SIGNAL(triggered()),
  65           this, SLOT(loadMotifList()));
  66
  67   loadMupaAction = new QAction(tr("Load Mussa Parameters"), this);
  68   connect(loadMupaAction, SIGNAL(triggered()),
  69           this, SLOT(loadMupa()));
  70
  71   loadSavedAnalysisAction = new QAction(tr("Load &Analysis"), this);
  72   connect(loadSavedAnalysisAction, SIGNAL(triggered()),
  73           this, SLOT(loadSavedAnalysis()));
  74
  75   saveMotifListAction = new QAction(tr("Save Motifs"), this);
  76   connect(saveMotifListAction, SIGNAL(triggered()),
  77           this, SLOT(saveMotifList()));
  78
  79   showMussaViewToolbarAction = new QAction(tr("Show Toolbar"), this);
  80   connect(showMussaViewToolbarAction, SIGNAL(triggered()),
  81           this, SLOT(showMussaToolbar()));
  82
  83   toggleMotifsAction = new QAction(tr("Toggle Motifs"), this);
  84   connect(toggleMotifsAction, SIGNAL(triggered()),
  85           this, SLOT(toggleMotifs()));
  86
  87   toggleMotifsAction->setCheckable(true);
  88   toggleMotifsAction->setIcon(QIcon("icons/motif_icon.png"));
  89 }
  90
  91 void PathWindow::setupMainMenu()
  92 {
  93   // we need to run setupActions first
  94   assert (closeAction != 0);
  95
  96   QMenu *newMenu;
  97   newMenu = menuBar()->addMenu(tr("&File"));
  98   newMenu->addAction(createNewAnalysisAction);
  99   newMenu->addAction(loadMupaAction);
 100   newMenu->addAction(loadSavedAnalysisAction);
 101   newMenu->addAction(createSubAnalysisAction);
 102   newMenu->addSeparator();
 103   newMenu->addAction(loadMotifListAction);
 104   newMenu->addAction(saveMotifListAction);
 105   newMenu->addSeparator();
 106   newMenu->addAction(closeAction);
 107
 108   newMenu = menuBar()->addMenu(tr("&View"));
 109   newMenu->addAction(showMussaViewToolbarAction);
 110
 111   newMenu = menuBar()->addMenu(tr("&Help"));
 112   newMenu->addAction(aboutAction);
 113 }
 114
 115 void PathWindow::about()
 116 {
 117   QMessageBox::about(this, tr("About mussa"),
 118       tr("Welcome to Multiple Species Sequence Analysis\n"
 119          "(c) 2005-2006 California Institute of Technology\n"
 120          "Tristan De Buysscher, Diane Trout\n"));
 121 }
 122
 123 void PathWindow::createNewAnalysis()
 124 {
 125   NotImplementedBox();
 126 }
 127
 128 void PathWindow::createSubAnalysis()
 129 {
 130   NotImplementedBox();
 131 }
 132
 133 void PathWindow::loadMotifList()
 134 {
 135   NotImplementedBox();
 136 }
 137
 138 void PathWindow::loadMupa()
 139 {
 140   QString caption("Load a mussa parameter file");
 141   QString filter("Mussa Parameters (*.mupa)");
 142   QString mupa_path = QFileDialog::getOpenFileName(this,
 143                                                    caption,
 144                                                    QDir::currentPath(),
 145                                                    filter);
 146   mussaAnalysis.load_mupa_file(mupa_path.toStdString());
 147 }
 148
 149 void PathWindow::loadSavedAnalysis()
 150 {
 151   NotImplementedBox();
 152 }
 153
 154 void PathWindow::saveMotifList()
 155 {
 156   NotImplementedBox();
 157 }
 158
 159 void PathWindow::showMussaToolbar()
 160 {
 161   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 162   mussaViewTB->show();
 163   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 164 }
 165
 166 void PathWindow::toggleMotifs()
 167 {
 168   NotImplementedBox();
 169 }
 170
 171 void PathWindow::NotImplementedBox()
 172 {
 173   QMessageBox::warning(this, QObject::tr("mussa"), QObject::tr("Not implemented yet"));
 174 }
 175
 176