setup.py

   1 from setuptools import setup, Extension
   2
   3 import os
   4 mussa_ext = Extension("mussa", ["py/conserved_path.cpp",
   5                                 "py/glsequence.cpp",
   6                                 "py/module.cpp",
   7                                 "py/mussa.cpp",
   8                                 #"py/MussaWindow.cpp",
   9                                 "py/nway_paths.cpp",
  10                                 "py/sequence.cpp",
  11                                 "alg/annotation_colors.cpp",
  12                                 "alg/color.cpp",
  13                                 "alg/conserved_path.cpp",
  14                                 "alg/flp.cpp",
  15                                 "alg/flp_seqcomp.cpp",
  16                                 "alg/glseqbrowser.cpp",
  17                                 "alg/glsequence.cpp",
  18                                 "alg/mussa.cpp",
  19                                 "alg/nway_entropy.cpp",
  20                                 "alg/nway_other.cpp",
  21                                 "alg/nway_paths.cpp",
  22                                 #"alg/nway_refine",
  23                                 #"alg/parse_options.cpp",
  24                                 "alg/sequence.cpp"],
  25                       include_dirs=['/usr/include/boost',
  26                                     '.'
  27                                    #os.getcwd()
  28                                    ],
  29                       libraries=['boost_python',
  30                                  'boost_filesystem',
  31                                  'GL',
  32                                  ])
  33
  34 setup(name='mussa',
  35       version='0.0',
  36       ext_modules=[mussa_ext])
  37