Imported Upstream version 0.7

[pysam.git] / pysam.egg-info / SOURCES.txt

diff --git a/pysam.egg-info/SOURCES.txt b/pysam.egg-info/SOURCES.txt
index 6f8ca43c3ff766feb62846754803ec4f991333db..b59e9141e7d3bbe977de0a993c4898428b249906 100644 (file)
--- a/pysam.egg-info/SOURCES.txt
+++ b/pysam.egg-info/SOURCES.txt
@@ -3,7 +3,7 @@ INSTALL
 KNOWN_BUGS
 MANIFEST.in
 THANKS
-ez_setup.py
+distribute_setup.py
 setup.cfg
 setup.py
 pysam/Pileup.py
@@ -45,12 +45,11 @@ samtools/bam_endian.h
 samtools/bam_import.c.pysam.c
 samtools/bam_index.c.pysam.c
 samtools/bam_lpileup.c.pysam.c
-samtools/bam_maqcns.c.pysam.c
-samtools/bam_maqcns.h
 samtools/bam_mate.c.pysam.c
 samtools/bam_md.c.pysam.c
 samtools/bam_pileup.c.pysam.c
 samtools/bam_plcmd.c.pysam.c
+samtools/bam_reheader.c.pysam.c
 samtools/bam_rmdup.c.pysam.c
 samtools/bam_rmdupse.c.pysam.c
 samtools/bam_sort.c.pysam.c
@@ -64,8 +63,6 @@ samtools/errmod.c.pysam.c
 samtools/errmod.h
 samtools/faidx.c.pysam.c
 samtools/faidx.h
-samtools/glf.c.pysam.c
-samtools/glf.h
 samtools/kaln.c.pysam.c
 samtools/kaln.h
 samtools/khash.h
@@ -78,7 +75,6 @@ samtools/kseq.h
 samtools/ksort.h
 samtools/kstring.c.pysam.c
 samtools/kstring.h
-samtools/msvc_compat.h
 samtools/phase.c.pysam.c
 samtools/pysam.h
 samtools/razf.c.pysam.c
@@ -101,11 +97,13 @@ samtools/bcftools/index.c.pysam.c
 samtools/bcftools/kfunc.c.pysam.c
 samtools/bcftools/kmin.c.pysam.c
 samtools/bcftools/kmin.h
+samtools/bcftools/mut.c.pysam.c
 samtools/bcftools/prob1.c.pysam.c
 samtools/bcftools/prob1.h
 samtools/bcftools/vcf.c.pysam.c
 samtools/misc/md5.c.pysam.c
 samtools/misc/md5.h
+samtools/misc/seqtk.c.pysam.c
 samtools/win32/xcurses.h
 samtools/win32/zconf.h
 samtools/win32/zlib.h
@@ -122,7 +120,6 @@ tabix/kseq.h
 tabix/ksort.h
 tabix/kstring.c.pysam.c
 tabix/kstring.h
-tabix/msvc_compat.h
 tabix/pysam.h
 tabix/tabix.h
 tests/00README.txt
@@ -138,9 +135,39 @@ tests/ex7.sam
 tests/ex8.sam
 tests/ex9_fail.bam
 tests/ex9_nofail.bam
+tests/example.bed.gz
+tests/example.bed.gz.tbi
 tests/example.gtf.gz
 tests/example.gtf.gz.tbi
 tests/example.py
+tests/example.vcf40
+tests/example_btag.sam
+tests/example_empty_header.bam
+tests/example_unmapped_reads_no_sq.sam
+tests/example_user_header.sam
+tests/issue100.bam
 tests/pysam_test.py
 tests/segfault_tests.py
-tests/tabix_test.py
\ No newline at end of file
+tests/tabix_test.py
+tests/tag_bug.bam
+tests/vcf-examples/10.vcf
+tests/vcf-examples/11.vcf
+tests/vcf-examples/12.vcf
+tests/vcf-examples/13.vcf
+tests/vcf-examples/15.vcf
+tests/vcf-examples/16.vcf
+tests/vcf-examples/18.vcf
+tests/vcf-examples/2.vcf
+tests/vcf-examples/20.vcf
+tests/vcf-examples/21.vcf
+tests/vcf-examples/22.vcf
+tests/vcf-examples/23.vcf
+tests/vcf-examples/24.vcf
+tests/vcf-examples/3.vcf
+tests/vcf-examples/4.vcf
+tests/vcf-examples/5.vcf
+tests/vcf-examples/6.vcf
+tests/vcf-examples/7.vcf
+tests/vcf-examples/8.vcf
+tests/vcf-examples/9.vcf
+tests/vcf-examples/issue85.vcf
\ No newline at end of file