Imported Upstream version 0.5

[pysam.git] / samtools / bcftools / bcf.h

diff --git a/samtools/bcftools/bcf.h b/samtools/bcftools/bcf.h
index 822ae5cf80fd7f9dc375259524935c933f088323..ba6dbe9b42ae033c6b3c179a730a48312cf927dd 100644 (file)
--- a/samtools/bcftools/bcf.h
+++ b/samtools/bcftools/bcf.h
@@ -28,8 +28,6 @@
 #ifndef BCF_H
 #define BCF_H
 
-#define BCF_VERSION "0.1.17-dev (r973:277)"
-
 #include <stdint.h>
 #include <zlib.h>
 
@@ -152,10 +150,6 @@ extern "C" {
        int bcf_fix_gt(bcf1_t *b);
        // update PL generated by old samtools
        int bcf_fix_pl(bcf1_t *b);
-       // convert PL to GLF-like 10-likelihood GL
-       int bcf_gl10(const bcf1_t *b, uint8_t *gl);
-       // convert up to 4 INDEL alleles to GLF-like 10-likelihood GL
-       int bcf_gl10_indel(const bcf1_t *b, uint8_t *gl);
 
        // string hash table
        void *bcf_build_refhash(bcf_hdr_t *h);