Imported Upstream version 0.6

[pysam.git] / samtools / bedidx.c.pysam.c

diff --git a/samtools/bedidx.c.pysam.c b/samtools/bedidx.c.pysam.c
index c3ab06ff5a82be4e4c377bdb9c343f30754418c4..2bbb05f5347849eaf7f2689fb78152cae732c241 100644 (file)
--- a/samtools/bedidx.c.pysam.c
+++ b/samtools/bedidx.c.pysam.c
@@ -6,6 +6,10 @@
 #include <stdio.h>
 #include <zlib.h>
 
+#ifdef _WIN32
+#define drand48() ((double)rand() / RAND_MAX)
+#endif
+
 #include "ksort.h"
 KSORT_INIT_GENERIC(uint64_t)
 
@@ -121,8 +125,10 @@ void *bed_read(const char *fn)
                        if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0])) {
                                beg = atoi(str->s); // begin
                                if (dret != '\n') {
-                                       if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0]))
+                                       if (ks_getuntil(ks, 0, str, &dret) > 0 && isdigit(str->s[0])) {
                                                end = atoi(str->s); // end
+                                               if (end < beg) end = -1;
+                                       }
                                }
                        }
                }