Imported Upstream version 0.1.5c
authorCharles Plessy <plessy@debian.org>
Tue, 8 Sep 2009 10:38:06 +0000 (19:38 +0900)
committerCharles Plessy <plessy@debian.org>
Tue, 8 Sep 2009 10:38:06 +0000 (19:38 +0900)
commitb27e00385f41769d03a8cca4dbd71275fc9fa906
tree0fa3fbfa6fde65a2c1cd550e7bbca1852daceb81
Imported Upstream version 0.1.5c
68 files changed:
AUTHORS [new file with mode: 0644]
COPYING [new file with mode: 0644]
ChangeLog [new file with mode: 0644]
INSTALL [new file with mode: 0644]
Makefile [new file with mode: 0644]
NEWS [new file with mode: 0644]
bam.c [new file with mode: 0644]
bam.h [new file with mode: 0644]
bam_aux.c [new file with mode: 0644]
bam_color.c [new file with mode: 0644]
bam_endian.h [new file with mode: 0644]
bam_import.c [new file with mode: 0644]
bam_index.c [new file with mode: 0644]
bam_lpileup.c [new file with mode: 0644]
bam_maqcns.c [new file with mode: 0644]
bam_maqcns.h [new file with mode: 0644]
bam_mate.c [new file with mode: 0644]
bam_md.c [new file with mode: 0644]
bam_pileup.c [new file with mode: 0644]
bam_plcmd.c [new file with mode: 0644]
bam_rmdup.c [new file with mode: 0644]
bam_rmdupse.c [new file with mode: 0644]
bam_sort.c [new file with mode: 0644]
bam_stat.c [new file with mode: 0644]
bam_tview.c [new file with mode: 0644]
bamtk.c [new file with mode: 0644]
bgzf.c [new file with mode: 0644]
bgzf.h [new file with mode: 0644]
bgzip.c [new file with mode: 0644]
examples/00README.txt [new file with mode: 0644]
examples/Makefile [new file with mode: 0644]
examples/calDepth.c [new file with mode: 0644]
examples/ex1.fa [new file with mode: 0644]
examples/ex1.sam.gz [new file with mode: 0644]
faidx.c [new file with mode: 0644]
faidx.h [new file with mode: 0644]
glf.c [new file with mode: 0644]
glf.h [new file with mode: 0644]
khash.h [new file with mode: 0644]
knetfile.c [new file with mode: 0644]
knetfile.h [new file with mode: 0644]
kseq.h [new file with mode: 0644]
ksort.h [new file with mode: 0644]
kstring.c [new file with mode: 0644]
kstring.h [new file with mode: 0644]
misc/Makefile [new file with mode: 0644]
misc/blast2sam.pl [new file with mode: 0755]
misc/bowtie2sam.pl [new file with mode: 0755]
misc/export2sam.pl [new file with mode: 0755]
misc/interpolate_sam.pl [new file with mode: 0755]
misc/maq2sam.c [new file with mode: 0644]
misc/md5.c [new file with mode: 0644]
misc/md5.h [new file with mode: 0644]
misc/md5fa.c [new file with mode: 0644]
misc/novo2sam.pl [new file with mode: 0755]
misc/samtools.pl [new file with mode: 0755]
misc/soap2sam.pl [new file with mode: 0755]
misc/wgsim.c [new file with mode: 0644]
misc/wgsim_eval.pl [new file with mode: 0755]
misc/zoom2sam.pl [new file with mode: 0755]
razf.c [new file with mode: 0644]
razf.h [new file with mode: 0644]
razip.c [new file with mode: 0644]
sam.c [new file with mode: 0644]
sam.h [new file with mode: 0644]
sam_view.c [new file with mode: 0644]
samtools.1 [new file with mode: 0644]
source.dot [new file with mode: 0644]