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report run_type
author
Diane Trout
<diane@caltech.edu>
Thu, 3 Dec 2015 22:48:39 +0000
(14:48 -0800)
committer
Diane Trout
<diane@caltech.edu>
Thu, 3 Dec 2015 22:48:39 +0000
(14:48 -0800)
htsworkflow/templates/aws_metadata.sparql
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diff --git
a/htsworkflow/templates/aws_metadata.sparql
b/htsworkflow/templates/aws_metadata.sparql
index 0468a231ac5091f1f4868ddf419de4430f57bbe0..9bada72f52158bde1a40f930b966739ff483acbf 100644
(file)
--- a/
htsworkflow/templates/aws_metadata.sparql
+++ b/
htsworkflow/templates/aws_metadata.sparql
@@
-6,7
+6,7
@@
PREFIX ncbiTaxon: <http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=>
PREFIX geoSoft: <http://www.ncbi.nlm.nih.gov/geo/info/soft2.html#>
PREFIX cells: <http://encodewiki.ucsc.edu/EncodeDCC/index.php/Cell_lines#>
PREFIX geoSoft: <http://www.ncbi.nlm.nih.gov/geo/info/soft2.html#>
PREFIX cells: <http://encodewiki.ucsc.edu/EncodeDCC/index.php/Cell_lines#>
-select distinct ?dataset ?replicate ?award ?lab ?lane ?read_length ?barcode ?submitted_file_name ?file_format ?file_size ?output_type ?md5sum ?flowcell ?machine ?platform
+select distinct ?dataset ?replicate ?award ?lab ?lane ?read_length ?barcode ?submitted_file_name ?file_format ?file_size ?output_type ?md5sum ?flowcell ?machine ?platform
?run_type
WHERE {
<{{submission}}> a submissionOntology:submission ;
encode3:dataset ?dataset ;
WHERE {
<{{submission}}> a submissionOntology:submission ;
encode3:dataset ?dataset ;