import stat
import sys
-from gaworkflow.util import fctracker
+from htsworkflow.util import fctracker
def find_lanes(flowcell_dir, flowcell_id, lane):
fcdb = fctracker.fctracker(opt.database)
cells = fcdb._get_flowcells(opt.where)
- root_dir = '/woldlab/mus/solexa-sequence'
+ root_dir = '/woldlab/loxcyc/data00/solexa-sequence'
library_dir = os.path.join(root_dir, 'libraries')
flowcell_dir = os.path.join(root_dir, 'flowcells')
srfs_dir = os.path.join(root_dir, 'srfs')