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2014-10-23	Diane Trout	Change unittest2 back into unittest.	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Directly generate compressed fastq files from HiSeq...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	the filename templates were moved from condorfastq...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Indicate when desplit_fastq didn't get any files to...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Make sure we can load a run file that lacks alignment...	commit \| commitdiff \| tree
2014-06-10	Diane Trout	Ignore the path when comparing filenames from the md5...	commit \| commitdiff \| tree
2014-01-22	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2014-01-22	Diane Trout	pass filters a string not an undefined variable	commit \| commitdiff \| tree
2013-12-23	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2013-12-23	Diane Trout	update settings for new location of WSGI_APPLICATION...	commit \| commitdiff \| tree
2013-12-23	Diane Trout	fix quote typos with the {% static %} template tag	commit \| commitdiff \| tree
2013-12-23	Diane Trout	Move wsgi into the actual project root.	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Update WSGI_APPLICATION to point to the updated location...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Start simplyfing settings by using from settings_local...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	add new wsgi.py driver	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Update templates to consistently use {% static %} instead...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Move loading DTD into a function as the call caused...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	move django imports around, change one function call...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Update exception caught for newer django?	commit \| commitdiff \| tree
2013-12-17	Diane Trout	use url function call for url definition instead of...	commit \| commitdiff \| tree
2013-12-17	Diane Trout	Move use of settings default into the function instead...	commit \| commitdiff \| tree
2013-12-10	Diane Trout	Merge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2013-12-09	Diane Trout	Add new paired library types to our hackish list for...	commit \| commitdiff \| tree
2013-12-06	Diane Trout	Attempt to be robust to not having an alignment in...	commit \| commitdiff \| tree
2013-12-06	Diane Trout	Attempt to be robust to not having an alignment in...	commit \| commitdiff \| tree
2013-12-05	Diane Trout	fix typo	commit \| commitdiff \| tree
2013-12-05	Diane Trout	fix typo	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Merge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Recent IPAR xml config blocks include the runfolder...	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Update for UCSC's validate manifest 1.7	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Provide reporting of what command failed when bigWigInfo...	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Recent IPAR xml config blocks include the runfolder...	commit \| commitdiff \| tree
2013-12-05	Diane Trout	Add a way to report what url was failing	commit \| commitdiff \| tree
2013-12-02	Diane Trout	Catch and report another class of exception	commit \| commitdiff \| tree
2013-10-21	Diane Trout	Pass additional information to the trackhub.	commit \| commitdiff \| tree
2013-10-17	Diane Trout	Add command line feature to srf command	commit \| commitdiff \| tree
2013-10-17	Diane Trout	Dynamically respond to the number of lanes.	commit \| commitdiff \| tree
2013-10-17	Diane Trout	Fix typo.	commit \| commitdiff \| tree
2013-10-17	Diane Trout	Merge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2013-10-11	Diane Trout	Make it possible to set a label on a track.	commit \| commitdiff \| tree
2013-10-09	Diane Trout	add replaces / replace_reason generation to trackhub...	commit \| commitdiff \| tree
2013-10-09	Diane Trout	remove spurious newline	commit \| commitdiff \| tree
2013-10-08	Diane Trout	Be more forgiving about the md5sum filename path	commit \| commitdiff \| tree
2013-10-08	Diane Trout	Add helpful logging information to explain missing...	commit \| commitdiff \| tree
2013-07-03	Diane Trout	Generate manifest files for ENCODE3	commit \| commitdiff \| tree
2013-07-01	Diane Trout	Merge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2013-07-01	Diane Trout	Add the option to copy tree in addition to making a...	commit \| commitdiff \| tree
2013-02-01	Diane Trout	Preliminary implementation of trackDb generation.	commit \| commitdiff \| tree
2013-02-01	Diane Trout	Forgot to import an exception I used	commit \| commitdiff \| tree
2013-02-01	Diane Trout	Make a sample key list to go along with our lane list	commit \| commitdiff \| tree
2013-01-16	Diane Trout	Support scanning HiSeq runs with multiple analyses.	commit \| commitdiff \| tree
2013-01-16	Diane Trout	Thrown an exception if we can't parse base calling...	commit \| commitdiff \| tree
2013-01-15	Diane Trout	Start making documentation for htsworkflow.	commit \| commitdiff \| tree
2013-01-09	Diane Trout	A better resolution to a possible circular dependency.	commit \| commitdiff \| tree
2013-01-09	Diane Trout	Don't accidentally transform an object into a tuple.	commit \| commitdiff \| tree
2013-01-08	Diane Trout	Merge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2013-01-08	Diane Trout	Try to make Aligned result directories optional in...	commit \| commitdiff \| tree
2013-01-08	Diane Trout	Add unaligned stats files to hiseq test case	commit \| commitdiff \| tree
2013-01-08	Diane Trout	Tweak timestamp format.	commit \| commitdiff \| tree
2012-12-14	Diane Trout	Gerald's time-stamp format was inconsistent.	commit \| commitdiff \| tree
2012-12-14	Diane Trout	Make my ChangeList sub-class compatibile with Django 1.3	commit \| commitdiff \| tree
2012-12-13	Diane Trout	Make the inventory pages work with the new HTSChangeList.	commit \| commitdiff \| tree
2012-12-13	Diane Trout	Django 1.4 requires the csrf token for posts.	commit \| commitdiff \| tree
2012-12-13	Diane Trout	Use specific time formatting instead of locale '%c'	commit \| commitdiff \| tree
2012-12-13	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow...	commit \| commitdiff \| tree
2012-12-12	Diane Trout	Simplify linking fastq files to their library id.	commit \| commitdiff \| tree
2012-12-08	Diane Trout	Add a FastqName class to create and parse standardized...	commit \| commitdiff \| tree
2012-11-30	Diane Trout	Change my copied version of admin.changelist to a subclass.	commit \| commitdiff \| tree
2012-11-30	Diane Trout	The formatting for the model name changed.	commit \| commitdiff \| tree
2012-11-29	Diane Trout	Add a few more records for django db initial_data.json.	commit \| commitdiff \| tree
2012-11-29	Diane Trout	Use unittest2's module hooks for setting up the django...	commit \| commitdiff \| tree
2012-11-29	Diane Trout	Change csrf imports and database settings for django 1.4	commit \| commitdiff \| tree
2012-11-29	Diane Trout	Remove prints that were being called in test code.	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Changed name= to verbose_name= for LibraryType.	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Make extra sure Django's setup test environment is...	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Convert to unittest2	commit \| commitdiff \| tree
2012-11-28	Diane Trout	Convert to unittest2	commit \| commitdiff \| tree
2012-11-27	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2012-11-27	Diane Trout	Ignoring the missing type RDF error for the page under...	commit \| commitdiff \| tree
2012-11-27	Diane Trout	Add dependencies to the setup.py	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Test presence of species & species name on library...	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Correctly implement merging Notification & Manager...	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Renamed various django tests.py to test_module.py	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Ignore .tox directory	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Fix RDF schema problems with lane_number and species.	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Run the library detail page through RDF validation.	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Change add_default_schema to use pkg_resources feature...	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Add dependency information to the setup.py script	commit \| commitdiff \| tree
2012-11-20	Diane Trout	rdf:Resource can be either a resource or a blank node.	commit \| commitdiff \| tree
2012-11-20	Diane Trout	Uniquely merge BCC and Manager lists for sending notificatio...	commit \| commitdiff \| tree
2012-11-16	Diane Trout	Further attempts to validate RDF models.	commit \| commitdiff \| tree
2012-11-14	Diane Trout	Add error message for typoing a result map filename.	commit \| commitdiff \| tree
2012-11-14	Diane Trout	Merge branch 'master' of mus.cacr.caltech.edu:htsworkflow	commit \| commitdiff \| tree
2012-10-11	Diane Trout	Catch another lookup error.	commit \| commitdiff \| tree
2012-09-27	Diane Trout	older librdf wanted to include type information when...	commit \| commitdiff \| tree
2012-09-27	Diane Trout	When collecting files for a geo submission, group on...	commit \| commitdiff \| tree
2012-09-25	Diane Trout	This might actually generate soft file with raw & supplement...	commit \| commitdiff \| tree
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