htsworkflow.git
2015-03-18 Diane Troutdrop support for simplejson. were only caring about...
2015-03-18 Diane Troutimport ConfigParser classes from six.moves.configparser
2015-03-18 Diane Troutuse absolute_import
2015-02-03 Diane Troutnew json code returns [] when there are no lanes
2015-02-03 Diane Troutconvert to unicode_literals
2015-02-02 Diane Trouttake advantage of absolute_import to simplify import...
2015-02-02 Diane Troutbase64.encodestring needs a bytearray in python3
2015-02-02 Diane TroutReplace elif list() > int() with else
2015-01-30 Diane Troutproperly call usrlib.parse instead of urlparse
2015-01-30 Diane TroutConvert alphanum sort from comparitor to key operator
2015-01-29 Diane Troutconvert from failUnlessEqual to assertEqual
2015-01-29 Diane Troutupdate srf2fastq detection code to work with byte arrays
2015-01-29 Diane Troutassume we are writing text with gzip
2015-01-29 Diane Troutreplace iterkeys with python 3 equivalents
2015-01-29 Diane Troutconvert has_key to X in dictionary
2015-01-29 Diane Troutuse six.moves to work around urllib / urllib2 / urlpars...
2015-01-29 Diane Troutremove unicode_literals from things going to redland RDF
2015-01-29 Diane Troutremove some commented out code
2015-01-29 Diane Troutconvert some print statements to logger messages
2015-01-29 Diane Troutconvert to print_function, and start adding unicode_lit...
2015-01-29 Diane Troutput #!/usr/bin/env python in the right place
2015-01-29 Diane Troutremove ,'s from more except blocks, and now a raise too
2015-01-29 Diane Troutmore use six.moves to import StringIO
2015-01-29 Diane Troutuse six.moves to get to python3-style urllib
2015-01-29 Diane Troutwhitespace-cleanup
2015-01-29 Diane Troutremove some commented out code
2015-01-29 Diane Troutconvert to print_function
2015-01-29 Diane Troutuse force_text instead of force_unicode for python2...
2015-01-29 Diane Troutimport StringIO from six.moves
2015-01-29 Diane Troutuse six to work around rename of configparser
2015-01-29 Diane TroutConvert old style except blocks to except Exception...
2015-01-28 Diane Troutmake the search tool more flexible
2015-01-26 Diane Troutremove unused code
2015-01-21 Diane TroutUpdate test_retrieve_config to work with factories
2015-01-14 Diane Troutfix spelling error in module name
2015-01-13 Diane TroutDon't pass null authentication information to ENCODED.
2015-01-13 Diane Troutuse absolute_import and print_function
2015-01-13 Diane TroutUpdate inventory tests to use factory boy.
2015-01-12 Diane Troutmove the file type test cases out into their own module
2015-01-12 Diane Troutuse migrations for experiments, and use migrations...
2015-01-10 Diane Troutget_schema_url only works on object types now, so chang...
2015-01-10 Diane Troutat some point I added code that used base64, hashlib...
2015-01-10 Diane TroutForgot to disable loading ClusterStation and Sequencer...
2015-01-10 Diane TroutConvert experiments modules to use factories instead...
2015-01-10 Diane TroutImprove samples_factory generated objects.
2015-01-10 Diane Troutunimportant whitespace changes, at least the lines...
2015-01-10 Diane Troutwhitespace changes
2015-01-10 Diane Troutfix typo -- or at least make it consistent. antigen...
2015-01-10 Diane Troutmove cluster station and sequencer tests out into their...
2015-01-10 Diane TroutUse logger instead of trying to print to stdout. especi...
2015-01-09 Diane Troutone should only return json objects. so put our arrays...
2014-12-13 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor...
2014-12-13 Diane TroutAdd document registration class.
2014-12-13 Diane Troutadd more type checking for parsing object type from...
2014-12-13 Diane Troutadd some helpful log messages
2014-12-01 Diane Troutadd ability to adjust some log level messages
2014-12-01 Diane Troutcommit script to copy jumpgate sqlite database to felca...
2014-12-01 Diane Troutrequire django 1.7 and factory boy for newer test code
2014-11-07 Diane TroutAdd some code to help read metadata out of spreadsheets.
2014-11-03 Diane Troutforgot to change one test to use factory
2014-11-01 Diane TroutThe makemigrations code didn't like how I was setting...
2014-11-01 Diane Troutname get_query_set was deprecated in favor of get_queryset
2014-11-01 Diane TroutConvert samples app to use migrations.
2014-10-29 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor...
2014-10-29 Diane Troutactually don't track the sqlite3 database
2014-10-27 Diane Troutcomment out benderjab dependency, as were not using...
2014-10-27 Diane TroutChange the settings default to work with the two scoops...
2014-10-23 Diane Troutimport os, so we can use os.path.join
2014-09-24 Diane Troutrelax requirements to make it easier to install on...
2014-09-12 Diane Troutmake it easier to override variables in ENCODED class
2014-07-28 Diane Troutadd frozen package list
2014-07-26 Diane Troutconfigure a mock keyring
2014-07-25 Diane Troutmake whitespace pep8 complient
2014-07-25 Diane TroutUse two-scoop style multiple settings file.
2014-07-24 Diane TroutDCC example code sets both content-type and accept...
2014-07-24 Diane Troutpep8 whitespace cleanup.
2014-07-24 Diane Troutcreate exception using modern python syntax
2014-07-24 Diane Troutremove a commented out import
2014-07-24 Diane TroutFlatten project hierarchy, moving djano applications...
2014-06-23 Diane Troutwhitespace cleanup
2014-06-23 Diane Troutclean up for pep8 compliance.
2014-06-23 Diane Troutcode cleanup, remove commented out code and adjust...
2014-06-23 Diane TroutAttempt to split common initial data from wold lab...
2014-06-23 Diane TroutRemove very old misplaced initial data fixtures
2014-06-19 Diane TroutAdd fields list to a few ModelForms Meta class.
2014-06-19 Diane TroutRename get_query_set to get_queryset
2014-06-19 Diane TroutRename HttpResponse parameter mimetype to content_type
2014-06-19 Diane Troutremove file created by typoing file name
2014-06-19 Diane TroutChange unittest2 back into unittest.
2014-06-19 Diane TroutExplicitly list initial_data.json for the test data...
2014-06-10 Diane TroutAdd post_json as some DCC objects are created with...
2014-06-10 Diane TroutRename headers to json_headers for requests (seemed...
2014-06-10 Diane TroutUpdates to jsonld context for the DCC schemas.
2014-06-10 Diane TroutUpdate test_encoded test cases due to https now being...
2014-06-10 Diane TroutDCC switched to https
2014-06-10 Diane TroutUpdate fastqname code & test code to better support...
2014-06-10 Diane TroutDirectly generate compressed fastq files from HiSeq...
2014-06-10 Diane Troutthe filename templates were moved from condorfastq...
2014-06-10 Diane TroutIndicate when desplit_fastq didn't get any files to...
2014-06-10 Diane TroutMake sure we can load a run file that lacks alignment...
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