py/CMakeLists.txt

   1 set(Boost_USE_STATIC_LIBS   OFF)
   2 set(Boost_USE_MULTITHREADED ON)
   3 FIND_PACKAGE(Boost 1.34.1 COMPONENTS python filesystem serialization)
   4 FIND_PACKAGE(OpenGL)
   5 FIND_PACKAGE(PythonLibs)
   6 FIND_PACKAGE(PythonInterp)
   7 # SET(QT_DONT_USE_QTGUI 1)
   8 FIND_PACKAGE(Qt4)
   9 INCLUDE( ${QT_USE_FILE} )
  10
  11
  12 IF(Boost_PYTHON_LIBRARY)
  13   INCLUDE_DIRECTORIES(${PYTHON_INCLUDE_PATH} ${QT_INCLUDES})
  14   SET(SOURCES
  15         stl_container_adapter.cpp
  16         alphabet.cpp
  17         annot.cpp
  18         annotation_colors.cpp
  19         annotations.cpp
  20         conserved_path.cpp
  21         drawable.cpp
  22         flp.cpp
  23         glsequence.cpp
  24         module.cpp
  25         mussa.cpp
  26         nway_paths.cpp
  27         seq_span.cpp
  28         sequence.cpp
  29         )
  30   SET(QUI_SOURCES
  31     module_qui.cpp
  32     qt.cpp
  33     sequence.cpp
  34     glsequence.cpp
  35     annotation_colors.cpp
  36     sequencebrowserwidget.cpp
  37   )
  38   SET(MUSSA_LIBRARIES
  39         mussa_core
  40         ${Boost_PYTHON_LIBRARY}
  41         ${Boost_SYSTEM_LIBRARY}
  42         ${Boost_FILESYSTEM_LIBRARY}
  43         ${Boost_SERIALIZATION_LIBRARY}
  44         ${OPENGL_gl_LIBRARY}
  45         ${QT_QTCORE_LIBRARY}
  46         #optimized ${QT_QTCORE_LIBRARY_RELEASE}
  47         #debug ${QT_QTCORE_LIBRARY_DEBUG}
  48      )
  49   GET_MUSSA_COMPILE_FLAGS(PY_CFLAGS)
  50   GET_MUSSA_LINK_FLAGS(PY_LDFLAGS)
  51
  52         # configure static core python library
  53   ADD_LIBRARY(mussa_py STATIC ${SOURCES})
  54   SET_TARGET_PROPERTIES(mussa_py PROPERTIES
  55                         COMPILE_FLAGS "${PY_CFLAGS}"
  56                         LINK_FLAGS "${PY_LDFLAGS}")
  57
  58   # configure core (shared) python module
  59   ADD_LIBRARY(mussa MODULE ${SOURCES})
  60   SET_TARGET_PROPERTIES(mussa PROPERTIES
  61                         PREFIX ""
  62                         COMPILE_FLAGS "${PY_CFLAGS}"
  63                         LINK_FLAGS "${PY_LDFLAGS}")
  64   TARGET_LINK_LIBRARIES(mussa
  65                         ${MUSSA_LIBRARIES}
  66                         ${PYTHON_LIBRARIES}
  67                         )
  68   # configure static gui python library
  69   #ADD_LIBRARY(mussaqui_py STATIC ${QUI_SOURCES})
  70   #  SET_TARGET_PROPERTIES(mussa_py PROPERTIES
  71   #                        COMPILE_FLAGS "${PY_CFLAGS}"
  72   #                        LINK_FLAGS "${PY_LDFLAGS}")
  73
  74   # configure gui (shared) python library
  75   ADD_LIBRARY(mussaqui MODULE ${QUI_SOURCES})
  76   SET_TARGET_PROPERTIES(mussaqui PROPERTIES
  77                        PREFIX ""
  78                        COMPILE_FLAGS "${PY_CFLAGS}"
  79                        LINK_FLAGS "${PY_LDFLAGS}")
  80   TARGET_LINK_LIBRARIES(mussaqui
  81                         mussa_qui
  82                         ${MUSSA_LIBRARIES}
  83                         ${PYTHON_LIBRARIES}
  84                         ${QT_QTGUI_LIBRARY}
  85                         ${QT_QTOPENGL_LIBRARY}
  86                        )
  87
  88   SET_SOURCE_FILES_PROPERTIES(
  89     ${SOURCES}
  90     ${QUI_SOURCES}
  91     PROPERTIES
  92     COMPILE_FLAGS "${PY_CFLAGS}"
  93   )
  94   SET_TARGET_PROPERTIES(
  95     ${STATIC_PYTHON_TARGETS} ${SHARED_PYTHON_TARGETS}
  96     PROPERTIES
  97     COMPILE_FLAGS "${PY_CFLAGS}"
  98     LINK_FLAGS "${PY_LDFLAGS}"
  99   )
 100
 101   IF(PYTHON_EXECUTABLE)
 102     SET(PYTEST_DIR ${CMAKE_SOURCE_DIR}/py/test/)
 103     ADD_TEST(TestAnnotations
 104                      ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestAnnotations.py)
 105     ADD_TEST(TestSeqSpan ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestSeqSpan.py)
 106     ADD_TEST(TestSequence ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestSequence.py)
 107     ADD_TEST(TestFlp ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestFlp.py)
 108     ADD_TEST(TestMussa ${PYTHON_EXECUTABLE} ${PYTEST_DIR}/TestMussa.py)
 109   ENDIF(PYTHON_EXECUTABLE)
 110 ELSE(Boost_PYTHON_LIBRARY)
 111   MESSAGE(STATUS "Not building mussa python extension, Boost python not found")
 112 ENDIF(Boost_PYTHON_LIBRARY)
 113
 114 ADD_SUBDIRECTORY(test)