vector<FLPs> empty_FLP_vector;
FLPs dummy_comp;
- //cout << "ana_file name " << ana_file.string() << endl;
+ //clog << "ana_file name " << ana_file.string() << endl;
analysis_name = ana_path.leaf();
- //cout << " ana_name " << analysis_name << endl;
+ //clog << " ana_name " << analysis_name << endl;
file_path_base = ana_path.branch_path() / analysis_name;
a_file_path = file_path_base / (analysis_name + ".muway");
- //cout << " loading museq: " << a_file_path.string() << endl;
+ //clog << " loading museq: " << a_file_path.string() << endl;
the_paths.load(a_file_path);
// perhaps this could be more elegent, but at least this'll let
// us know what our threshold and window sizes were when we load a muway
for (i = 1; i <= seq_num; i++)
{
boost::shared_ptr<Sequence> tmp_seq(new Sequence);
- //cout << "mussa_class: loading museq frag... " << a_file_path.string() << endl;
+ //clog << "mussa_class: loading museq frag... " << a_file_path.string() << endl;
tmp_seq->load_museq(a_file_path, i);
the_seqs.push_back(tmp_seq);
}
{
append_info.str("");
append_info << analysis_name << "_sp_" << i << "v" << i2 << ".flp";
- //cout << append_info.str() << endl;
+ //clog << append_info.str() << endl;
a_file_path = file_path_base / append_info.str();
- //cout << "path " << a_file_path.string() << endl;
+ //clog << "path " << a_file_path.string() << endl;
all_comps[i][i2].load(a_file_path);
- //cout << "real size = " << all_comps[i][i2].size() << endl;
+ //clog << "real size = " << all_comps[i][i2].size() << endl;
}
}
}