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mussa.git
2007-01-05
Diane Trout
add some newlines at the end of some of our files
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2007-01-04
Diane Trout
conditionally build the paircomp tests
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2007-01-04
Diane Trout
paircomp used the string find_first_not_of
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2007-01-04
Diane Trout
split unittests into seperate executables
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2006-12-21
Diane Trout
build paircomp if available
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2006-12-14
Diane Trout
len(mussa.paths()) should equal the number of found...
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2006-12-13
Diane Trout
be resistent to not creating the browser
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2006-12-13
Diane Trout
make mussawindow initialize icons
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2006-12-13
Diane Trout
try to reduce number of moveToThread warnings
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2006-12-12
Diane Trout
fix infinite loop for absolute pathnames
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2006-12-07
Diane Trout
provide get_py and get_py_ptr
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2006-12-07
Diane Trout
cut down on unnecessary linking to the python library
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2006-12-07
Diane Trout
Allocating objects in the constructor causes problems
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2006-12-05
Diane Trout
make compiled in python extension initialization more...
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2006-12-05
Diane Trout
directly build the python extension modules
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2006-12-05
Diane Trout
provide python interpreter for mussa qui via a seperate...
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2006-11-30
Diane Trout
allow adding and viewing sequences to an analysis from...
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2006-11-29
Diane Trout
add python interface to seqcomp
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2006-11-22
Diane Trout
Finish off setting sequence offset user interface
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2006-11-21
Diane Trout
quick option to show sequence properties window
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2006-11-21
Diane Trout
rename ok/cancel to okButton/cancelButton
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2006-11-21
Diane Trout
fix bad #ifdef names
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2006-11-17
Diane Trout
more fs::native for user supplied paths
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2006-11-02
Diane Trout
include sequence property editor source files
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2006-11-01
Diane Trout
allow copying files into a dmg
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2006-11-01
Brandon King
Mussagl Version number updated to 1.0
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2006-11-01
Brandon King
Win32 installer script update for 1.0
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2006-11-01
Brandon King
Mussagl Manual: 1.0 docs part 4
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2006-11-01
Brandon King
Mussagl Manual: mussa_manual.adp updated for 1.0 docs
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2006-10-31
Diane Trout
update CMakeLists.txt to build new SequencePropertiesWindow
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2006-10-31
Diane Trout
update osxdist for qt4.2.1
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2006-10-30
Diane Trout
move SubanalysisWindow code to a subdirectory
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2006-10-30
Diane Trout
include filename in unparsable annotation error message
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2006-10-30
Diane Trout
report filename for invalid fasta files
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2006-10-28
Diane Trout
don't use staticly allocated widgets
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2006-10-28
Diane Trout
add include QCloseEvent to MussaWindow.hpp
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2006-10-28
Diane Trout
allow verticle scrollbar for sequence browser widget
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2006-10-28
Diane Trout
compute the correct starting window size
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2006-10-27
Diane Trout
use pointers for zoom spinbox in ZoomWidget
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2006-10-28
Brandon King
Mussagl Manual: Docs 1.0 (part 3)
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2006-10-28
Brandon King
Mussagl Manual: Docs 1.0 updates (part two)
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2006-10-28
Brandon King
Mussagl Manual: Updates for Docs 1.0
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2006-10-27
Diane Trout
Use Qt4.2 openUrl to show manual
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2006-10-27
Diane Trout
implement set window state
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2006-10-26
Diane Trout
include icon extension for os x bundle information
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2006-10-26
Diane Trout
add copy sequence as string option
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2006-10-26
Diane Trout
display number of basepairs copied
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2006-10-26
Brandon King
Mussa Window Icon
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2006-10-24
Diane Trout
tagged release_1.0_rc3
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2006-10-24
Brandon King
Mussa Manual: spelling, wording, and grammer
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2006-10-24
Diane Trout
call set_soft_threshold after subanalysis
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2006-10-23
Diane Trout
Enable Qt4 tests
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2006-10-20
Diane Trout
add nl to end of 3 files
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2006-10-20
Diane Trout
avoid multiple calls to setSoftThreshold
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2006-10-20
Diane Trout
copy motifs to a new subanalysis
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2006-10-19
Diane Trout
fix motif loader under release build
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2006-10-19
Diane Trout
Sequence::rev_comp works on subsequences
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2006-10-18
Diane Trout
add to_upper_case to some sequence unittests
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2006-10-18
Brandon King
Mussa Manual: Screenshots + Performance section
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2006-10-18
Brandon King
Mussa Manual: Deleting a Motif
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2006-10-18
Brandon King
Mussa Manual: Multiple Mussa Windows
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2006-10-18
Brandon King
Mussa Manual: save on close & save motif default behavior
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2006-10-17
Diane Trout
be more forging of user provided file names
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2006-10-17
Diane Trout
remove old code
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2006-10-17
Diane Trout
ignore eclipse settings
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2006-10-17
Diane Trout
add a manually updated version number.
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2006-10-17
Diane Trout
test_mussa_python also had an unecesary QtOpenGL librar...
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2006-10-17
Diane Trout
attempt to make buildnum.py generate a useful header
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2006-10-17
Diane Trout
motif save should have a default extension.
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2006-10-17
Diane Trout
don't like QTOPENGL to python module
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2006-10-17
Diane Trout
changing motifs should make the analysis dirty
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2006-10-17
Brandon King
Mussa Manual: updated motif dialog section.
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2006-10-17
Diane Trout
always add a blank motif
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2006-10-17
Brandon King
Mussa Manual: Saving section
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2006-10-17
Brandon King
Mussa Manual: create/load analysis section updated
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2006-10-17
Diane Trout
more python interface to Sequence
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2006-10-17
Diane Trout
force loaded sequence to uppercase
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2006-10-17
Diane Trout
validate app bundle before shipping
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2006-10-17
Diane Trout
don't link against X11 on OS X
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2006-10-16
Brandon King
Mussa manual: Overview section update
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2006-10-16
Brandon King
Mussa Manual: Link to example data in UCSC genome brows...
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2006-10-14
Brandon King
Mussa Manual: Save to image
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2006-10-14
Diane Trout
don't seqcomp sequences that are too small
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2006-10-14
Brandon King
Fix for ticket:160
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2006-10-14
Brandon King
Mussa Manual: motif list file masks
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2006-10-14
Diane Trout
add operator< to ConservedPath
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2006-10-13
Brandon King
Build number python script
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2006-10-13
Brandon King
Save to image fix (ticket:96)
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2006-10-13
Diane Trout
save motifs with the analysis
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2006-10-13
Diane Trout
pass default_dir around
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2006-10-13
Diane Trout
change default_dir to a QDir
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2006-10-12
Diane Trout
cleanup image save dialog aesthetics
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2006-10-12
Diane Trout
tabs are of the devil
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2006-10-12
Brandon King
CMakeLists.txt: Added extra QT_LIBS depend to fix Qt...
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2006-10-12
Diane Trout
Fix initialization of QtAssistant
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2006-10-12
Diane Trout
better glyph offset computation
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2006-10-12
Brandon King
Windows installer script: updated to work in makelib...
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2006-10-12
Diane Trout
does createLocalAlignment work for a 3 way?
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2006-10-12
Diane Trout
add implementation for save motif menu item
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2006-10-12
Diane Trout
Make help a bit more reliable
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