projects
/
mussa.git
/ shortlog
commit
grep
author
committer
pickaxe
?
search:
re
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
mussa.git
2006-06-08
Diane Trout
Turn on more doxygen features
commit
|
commitdiff
|
tree
|
snapshot
2006-06-07
Brandon King
Manual: Progress towards retrieval data for mussa section
commit
|
commitdiff
|
tree
|
snapshot
2006-06-07
Brandon King
Manual Image Pack: UCSC Genome Broswer data retrieval...
commit
|
commitdiff
|
tree
|
snapshot
2006-06-06
Diane Trout
keep track of how far through a seqcomp we've gotten
commit
|
commitdiff
|
tree
|
snapshot
2006-06-03
Diane Trout
use Qt Signals & Slots for progress tracking
commit
|
commitdiff
|
tree
|
snapshot
2006-06-02
Brandon King
Warning dialog upon Mussa Manual (QAssistant) error.
commit
|
commitdiff
|
tree
|
snapshot
2006-05-27
Diane Trout
add callback for tracking analysis progress
commit
|
commitdiff
|
tree
|
snapshot
2006-05-27
Diane Trout
rename [gset_soft_thres to [gs]et_soft_threshold]
commit
|
commitdiff
|
tree
|
snapshot
2006-05-27
Diane Trout
configure cmake to include support for QtAssistant
commit
|
commitdiff
|
tree
|
snapshot
2006-05-26
Brandon King
Variable declared locally elsewere... not needed.
commit
|
commitdiff
|
tree
|
snapshot
2006-05-26
Brandon King
Mussagl Manual QAssistant Profile
commit
|
commitdiff
|
tree
|
snapshot
2006-05-26
Brandon King
Mussagl Manual QAssistant Patch
commit
|
commitdiff
|
tree
|
snapshot
2006-05-25
Diane Trout
let the keyboard reasonably control the browser window
commit
|
commitdiff
|
tree
|
snapshot
2006-05-25
Diane Trout
add some documentation for glseqbrowser::viewport*
commit
|
commitdiff
|
tree
|
snapshot
2006-05-25
Diane Trout
combine a declaration and assignment
commit
|
commitdiff
|
tree
|
snapshot
2006-05-24
Diane Trout
set all the QAction pointers to 0
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Brandon King
Manual: View mussa alignment section + minor fixes
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Brandon King
Updated Mussagl launched screenshot.
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Brandon King
Manual: Spelling patch
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Brandon King
Screenshot image pack (for manual)
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Brandon King
Conservation tracks + IUPAC Neucleotide Table
commit
|
commitdiff
|
tree
|
snapshot
2006-05-23
Diane Trout
rename ExtendedConservedPath for the old fltk code
commit
|
commitdiff
|
tree
|
snapshot
2006-05-22
Diane Trout
we should be defaulting to qt 4.1.2
commit
|
commitdiff
|
tree
|
snapshot
2006-05-22
Diane Trout
make linking python optional
commit
|
commitdiff
|
tree
|
snapshot
2006-05-20
Diane Trout
turn color back on
commit
|
commitdiff
|
tree
|
snapshot
2006-05-20
Diane Trout
ticket:62 fix local alignment
commit
|
commitdiff
|
tree
|
snapshot
2006-05-20
Diane Trout
specify what version of cmake is required
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Brandon King
Manual: Motif/Annotation documentation
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Brandon King
Load Motif List png
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Brandon King
New version of mussagl, updated screenshot.
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Brandon King
Manual: Main Window section added
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Brandon King
Screenshots for next patch of the manual.
commit
|
commitdiff
|
tree
|
snapshot
2006-05-17
Brandon King
Updated manual
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Diane Trout
rename the python extension to _mussa.so
commit
|
commitdiff
|
tree
|
snapshot
2006-05-18
Diane Trout
expose more of the sequence class to python
commit
|
commitdiff
|
tree
|
snapshot
2006-05-17
Diane Trout
finish implementing annotation by sequence
commit
|
commitdiff
|
tree
|
snapshot
2006-05-17
Diane Trout
switch to a character based spirit parser
commit
|
commitdiff
|
tree
|
snapshot
2006-05-17
Diane Trout
try to read fasta blocks in the annotation file
commit
|
commitdiff
|
tree
|
snapshot
2006-05-17
Diane Trout
use spirit parser for reading annot file
commit
|
commitdiff
|
tree
|
snapshot
2006-05-16
Diane Trout
add annotations by sequence string
commit
|
commitdiff
|
tree
|
snapshot
2006-05-11
Diane Trout
try to make setup.py multiplatform
commit
|
commitdiff
|
tree
|
snapshot
2006-05-11
Diane Trout
minor tweaks for building mussa under setup.py
commit
|
commitdiff
|
tree
|
snapshot
2006-05-11
Diane Trout
super simple mussa gui driver
commit
|
commitdiff
|
tree
|
snapshot
2006-05-11
Diane Trout
build all of mussagl as a python extension
commit
|
commitdiff
|
tree
|
snapshot
2006-05-10
Diane Trout
lets try letting python build mussa
commit
|
commitdiff
|
tree
|
snapshot
2006-05-10
Diane Trout
increase the use of python in mussa
commit
|
commitdiff
|
tree
|
snapshot
2006-05-04
Diane Trout
allow saving aligned window browser to image
commit
|
commitdiff
|
tree
|
snapshot
2006-05-04
Diane Trout
show the name of the analysis loaded
commit
|
commitdiff
|
tree
|
snapshot
2006-05-04
Diane Trout
allow opening multiple MussaWindows
commit
|
commitdiff
|
tree
|
snapshot
2006-04-19
Diane Trout
win32 paths need some conversion
commit
|
commitdiff
|
tree
|
snapshot
2006-04-18
Diane Trout
try to get mussagl to build on win32
commit
|
commitdiff
|
tree
|
snapshot
2006-04-18
Diane Trout
implement commandline arguments for makedmg
commit
|
commitdiff
|
tree
|
snapshot
2006-04-13
Diane Trout
the fasta error message should include the filename
commit
|
commitdiff
|
tree
|
snapshot
2006-04-13
Diane Trout
fix ticket:83 throw an error when we don't have a fasta...
commit
|
commitdiff
|
tree
|
snapshot
2006-04-13
Diane Trout
create an options structure to indicate if we need...
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
ticket:85 fix, extend code crashes with 1 path
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
use a custom target for python extension
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
record cmake commands to deal with some dependency...
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
default to building a debug version
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
put qt gui launching code into a function
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
AMD64 needs -fPIC for mussa_core
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
put spaces instead of <TAB> on gui/module.mk
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
ln -s is not that reliable
commit
|
commitdiff
|
tree
|
snapshot
2006-04-12
Diane Trout
build the python interface
commit
|
commitdiff
|
tree
|
snapshot
2006-04-11
Diane Trout
minor fixes for older buildsystems
commit
|
commitdiff
|
tree
|
snapshot
2006-04-08
Diane Trout
rename _LIB to _LIBRARY to be more consistent with...
commit
|
commitdiff
|
tree
|
snapshot
2006-04-07
Diane Trout
build fltk version and deal with debian qt4 weirdness
commit
|
commitdiff
|
tree
|
snapshot
2006-04-07
Diane Trout
make include gl.h multiplatform
commit
|
commitdiff
|
tree
|
snapshot
2006-04-07
Diane Trout
switch to using boost::filesystem
commit
|
commitdiff
|
tree
|
snapshot
2006-04-07
Diane Trout
put build environment support tools in makelib
commit
|
commitdiff
|
tree
|
snapshot
2006-04-06
Diane Trout
cmake setupfiles
commit
|
commitdiff
|
tree
|
snapshot
2006-04-04
Diane Trout
QSplitter has rendering problems on os x
commit
|
commitdiff
|
tree
|
snapshot
2006-04-04
Diane Trout
an int signal doesn't connect to a size_t slot
commit
|
commitdiff
|
tree
|
snapshot
2006-04-04
Diane Trout
allow making dmgs for things other than mussa
commit
|
commitdiff
|
tree
|
snapshot
2006-03-30
Diane Trout
allow running without using the gui
commit
|
commitdiff
|
tree
|
snapshot
2006-03-30
Diane Trout
better setup dialog label names
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
keep the sequence view at higher zoom level
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
motifs should render on top of annotations
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
make annotations big enough to show up
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
View sequence alignment at non default thresholds
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
choose alignment needs to force the sequences to redraw
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
Provide a zoom widget in MussaAlignedWindow
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
Move zoom spinbox into its own widget
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
setAlignment, as a target of a qt signal, needs to...
commit
|
commitdiff
|
tree
|
snapshot
2006-03-29
Diane Trout
ignore some generated product
commit
|
commitdiff
|
tree
|
snapshot
2006-03-28
Diane Trout
fix more warnings
commit
|
commitdiff
|
tree
|
snapshot
2006-03-28
Diane Trout
threshold widget shows both base pair and percents
commit
|
commitdiff
|
tree
|
snapshot
2006-03-28
Diane Trout
recover threshold and window size
commit
|
commitdiff
|
tree
|
snapshot
2006-03-28
Diane Trout
improve os x makefiles
commit
|
commitdiff
|
tree
|
snapshot
2006-03-28
Diane Trout
use qt resources for icons
commit
|
commitdiff
|
tree
|
snapshot
2006-03-25
Brandon King
First (incomplete) rough draft of the Mussagl Manual
commit
|
commitdiff
|
tree
|
snapshot
2006-03-23
Brandon King
Win32 Inno Setup installer script
commit
|
commitdiff
|
tree
|
snapshot
2006-03-23
Diane Trout
disable coloring things with reverse compliment colors.
commit
|
commitdiff
|
tree
|
snapshot
2006-03-23
Diane Trout
define an analysis should keep settings
commit
|
commitdiff
|
tree
|
snapshot
2006-03-23
Diane Trout
change from slider to spinner for threshold
commit
|
commitdiff
|
tree
|
snapshot
2006-03-23
Diane Trout
better sidebar rendering
commit
|
commitdiff
|
tree
|
snapshot
2006-03-22
Diane Trout
fix selection box coordinate bugs
commit
|
commitdiff
|
tree
|
snapshot
2006-03-22
Diane Trout
spurious mouseReleaseEvent caused a crash
commit
|
commitdiff
|
tree
|
snapshot
2006-03-22
Diane Trout
finish dialog box to setup an analysis
commit
|
commitdiff
|
tree
|
snapshot
2006-03-22
Diane Trout
Increase line thickness
commit
|
commitdiff
|
tree
|
snapshot
next