Imported Upstream version 0.7
[pysam.git] / tests / vcf-examples / 21.vcf
1 ##fileformat=VCFv4.1\r
2 ##INFO=<ID=Consensus,Number=1,Type=String,Description="Consensus validation result">\r
3 ##INFO=<ID=PacBio,Number=1,Type=String,Description="Status of PacBio for this site">\r
4 ##INFO=<ID=Sqnm,Number=1,Type=String,Description="Status of Sequenom for this site">\r
5 ##INFO=<ID=Sanger,Number=1,Type=String,Description="Status of Sanger Sequencing for this site">\r
6 ##INFO=<ID=NotCalledInValidationSamples,Number=.,Type=Flag,Description="Was not called polymorphic in sequencing for any of the passing validation samples; could still be polymorphic">\r
7 ##INFO=<ID=pcr454_ss,Number=1,Type=String,Description="Status of PCR-Roche 454 single-sample experiment for this site">\r
8 ##INFO=<ID=pcr454_ps,Number=1,Type=String,Description="Status of PCR-Roche 454 pooled-samples experiment for this site">\r
9 ##reference=file:///humgen/1kg/reference/human_g1k_v37.fasta\r
10 #CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO\r
11 20      207414  .       G       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
12 20      792106  .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
13 20      894031  .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
14 20      1508892 .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
15 20      1686745 .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
16 20      1818886 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
17 20      2062981 .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
18 20      2773229 .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
19 20      2817761 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
20 20      2994966 .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
21 20      3126723 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
22 20      3523369 .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
23 20      3635082 .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
24 20      3714080 .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
25 20      3905791 .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
26 20      3907250 .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
27 20      4171994 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
28 20      4246375 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
29 20      4375206 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
30 20      4434727 .       A       T       0       .       Consensus=Mono;PacBio=Mono;Sqnm=Mono;Sanger=Mono;pcr454_ss=NoCall;pcr454_ps=Poly\r
31 20      4495199 .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
32 20      4835415 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
33 20      4915769 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
34 20      4983198 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
35 20      5441171 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
36 20      5978029 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
37 20      6061317 .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Mono;pcr454_ps=Poly\r
38 20      6328925 .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
39 20      6675461 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
40 20      6976115 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
41 20      7013349 .       G       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
42 20      7039302 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
43 20      7638704 .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
44 20      7688381 .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
45 20      7726350 .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
46 20      7733957 .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
47 20      7850516 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
48 20      8095059 .       G       A       0       .       Consensus=Mono;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
49 20      8232012 .       T       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
50 20      8415290 .       A       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
51 20      8438535 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
52 20      8815233 .       G       A       0       .       Consensus=Poly;PacBio=Mono;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
53 20      8953629 .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Mono;pcr454_ps=Poly\r
54 20      9237267 .       T       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
55 20      9744549 .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
56 20      9780416 .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
57 20      10252552        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
58 20      10314038        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
59 20      10757416        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
60 20      11087688        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
61 20      11094107        .       G       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
62 20      11098680        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
63 20      11353163        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
64 20      11510559        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
65 20      11787224        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
66 20      11821024        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
67 20      11932295        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
68 20      11965311        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
69 20      12023599        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
70 20      12505523        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
71 20      12570054        .       A       C       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
72 20      12667452        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
73 20      12678271        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Mono;pcr454_ss=Poly;pcr454_ps=Poly\r
74 20      12704885        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
75 20      12733996        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
76 20      12737269        .       C       T       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
77 20      12788981        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
78 20      12828594        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
79 20      12999157        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
80 20      13083804        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
81 20      13197077        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
82 20      13217896        .       A       G       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
83 20      13276778        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
84 20      13375116        .       G       A       0       .       Consensus=Mono;PacBio=Mono;Sqnm=NoCall;NotCalledInValidationSamples;pcr454_ss=Mono;pcr454_ps=Mono\r
85 20      13648056        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
86 20      13672895        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
87 20      14160159        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
88 20      14266815        .       T       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
89 20      14865143        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
90 20      14882868        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
91 20      15244725        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
92 20      15277072        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
93 20      15390867        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
94 20      15785205        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
95 20      15833020        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
96 20      15847620        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
97 20      15953253        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
98 20      15964434        .       G       C       0       .       Consensus=NoCall;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
99 20      16183922        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
100 20      16190824        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
101 20      16557779        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
102 20      16730061        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
103 20      16794015        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
104 20      17048741        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
105 20      17299827        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
106 20      17299845        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
107 20      17390323        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
108 20      17624973        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
109 20      17666040        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
110 20      17735813        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
111 20      17794990        .       A       G       0       .       Consensus=Mono;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;pcr454_ss=NoCall;pcr454_ps=NoCall\r
112 20      17809418        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
113 20      17860794        .       C       T       0       .       Consensus=Poly;PacBio=Mono;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
114 20      17881936        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
115 20      17893097        .       C       G       0       .       Consensus=Mono;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Mono;pcr454_ps=Mono\r
116 20      18188883        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
117 20      18199319        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
118 20      18233699        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
119 20      18536869        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
120 20      18637785        .       T       C       0       .       Consensus=Mono;PacBio=NoCall;Sqnm=Mono;Sanger=Mono;NotCalledInValidationSamples;pcr454_ss=Mono;pcr454_ps=Mono\r
121 20      18763166        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
122 20      19102715        .       A       G       0       .       Consensus=Mono;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Mono;pcr454_ps=Mono\r
123 20      19244609        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
124 20      19573719        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
125 20      19815613        .       A       G       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
126 20      20511479        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;Sanger=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
127 20      20639358        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
128 20      21278490        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
129 20      21297718        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
130 20      21418269        .       A       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
131 20      21560553        .       A       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
132 20      21618451        .       G       A       0       .       Consensus=NoCall;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
133 20      21705723        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
134 20      22076189        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
135 20      22118677        .       T       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
136 20      22320721        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
137 20      22368918        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
138 20      23020003        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
139 20      23214163        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
140 20      23273877        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
141 20      23335790        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Mono\r
142 20      23790659        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
143 20      23830388        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
144 20      23837678        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
145 20      23901081        .       A       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
146 20      23946361        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
147 20      23949242        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
148 20      24539119        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
149 20      24986457        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
150 20      25183729        .       G       A       0       .       Consensus=Mono;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Mono;pcr454_ps=Mono\r
151 20      25277133        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
152 20      25292464        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
153 20      25528915        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
154 20      25851836        .       A       G       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
155 20      25970163        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
156 20      29920798        .       C       T       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
157 20      30007713        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
158 20      30051768        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
159 20      30183598        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
160 20      30604408        .       G       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
161 20      30759940        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
162 20      30881454        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=Poly\r
163 20      31356560        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
164 20      31450036        .       A       G       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Mono;pcr454_ss=Poly;pcr454_ps=Poly\r
165 20      31589920        .       A       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
166 20      31922121        .       C       T       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
167 20      32801430        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
168 20      32943975        .       G       T       0       .       Consensus=Mono;PacBio=Mono;Sqnm=Mono;pcr454_ss=NoCall;pcr454_ps=NoCall\r
169 20      33155812        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
170 20      34090682        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
171 20      34254080        .       C       T       0       .       Consensus=Mono;PacBio=Mono;Sqnm=NoCall;NotCalledInValidationSamples;pcr454_ss=Mono;pcr454_ps=Mono\r
172 20      34312126        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
173 20      34481504        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
174 20      34694577        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
175 20      35026572        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
176 20      35472344        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
177 20      35882698        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
178 20      36044719        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
179 20      36047623        .       C       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
180 20      36204890        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
181 20      36469514        .       G       C       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
182 20      36840217        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
183 20      37460945        .       C       T       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
184 20      37665246        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
185 20      37732397        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
186 20      37874645        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
187 20      37958191        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
188 20      37996273        .       C       T       0       .       Consensus=Mono;PacBio=Mono;Sqnm=NoCall;NotCalledInValidationSamples;pcr454_ss=Mono;pcr454_ps=Mono\r
189 20      38016547        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
190 20      38435682        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
191 20      38505534        .       A       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
192 20      38803278        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
193 20      38963803        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
194 20      38971986        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
195 20      39269586        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
196 20      39289390        .       C       A       0       .       Consensus=Mono;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;pcr454_ss=NoCall;pcr454_ps=NoCall\r
197 20      39318956        .       T       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=Poly\r
198 20      39736197        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
199 20      40241339        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
200 20      41473555        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
201 20      41878576        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
202 20      42022716        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
203 20      42033671        .       A       C       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
204 20      42270334        .       C       T       0       .       Consensus=NoCall;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
205 20      42449590        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
206 20      42521157        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
207 20      42624300        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
208 20      42984548        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
209 20      43200148        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
210 20      43425384        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
211 20      43521990        .       C       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
212 20      43565804        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
213 20      43591237        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
214 20      43805929        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
215 20      43866692        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
216 20      43902088        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
217 20      44478507        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
218 20      44768810        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
219 20      45151582        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
220 20      45414003        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
221 20      45776825        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
222 20      46454905        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
223 20      46823642        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
224 20      47001376        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
225 20      47079360        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
226 20      47248953        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
227 20      47480655        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
228 20      47529099        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
229 20      47703355        .       A       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
230 20      47919541        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
231 20      48126120        .       A       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
232 20      48157380        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
233 20      48233077        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
234 20      48488571        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
235 20      48534468        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
236 20      48631385        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
237 20      48654970        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
238 20      48708007        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
239 20      48979827        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
240 20      49100106        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
241 20      49509102        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
242 20      49631170        .       G       A       0       .       Consensus=Mono;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;pcr454_ss=Mono;pcr454_ps=Mono\r
243 20      50210361        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
244 20      50309600        .       C       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
245 20      50681296        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
246 20      50750138        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
247 20      51639257        .       G       A       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
248 20      51814664        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
249 20      51891088        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
250 20      52299250        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
251 20      52363435        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
252 20      52583941        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
253 20      52787584        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
254 20      53256945        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
255 20      54155398        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
256 20      54172374        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=Poly\r
257 20      54209446        .       A       G       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;Sanger=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
258 20      54317862        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
259 20      54852735        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
260 20      54889864        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
261 20      55208711        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
262 20      55220477        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
263 20      55224856        .       G       T       0       .       Consensus=NoCall;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
264 20      55441530        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
265 20      55585710        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
266 20      55630163        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
267 20      56031994        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
268 20      56316071        .       T       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
269 20      56366198        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
270 20      56703987        .       G       A       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;Sanger=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
271 20      56794829        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
272 20      56797026        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
273 20      56922427        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
274 20      57025102        .       A       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
275 20      57104529        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
276 20      57360225        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
277 20      57630386        .       T       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
278 20      57754033        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
279 20      57956631        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
280 20      57997801        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
281 20      58046279        .       C       G       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
282 20      58186723        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
283 20      58214460        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
284 20      58317759        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
285 20      58491642        .       A       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
286 20      58560045        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
287 20      58629232        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
288 20      58805192        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
289 20      58869523        .       A       G       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
290 20      59337535        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
291 20      59441596        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
292 20      59445223        .       G       A       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=Poly;pcr454_ps=Poly\r
293 20      59605846        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
294 20      59864395        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=NoCall;pcr454_ps=NoCall\r
295 20      60099821        .       G       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
296 20      60290551        .       A       G       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Mono;NotCalledInValidationSamples;Sanger=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
297 20      60362527        .       G       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
298 20      60516358        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
299 20      60559594        .       C       T       0       .       Consensus=Poly;PacBio=NoCall;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
300 20      60745115        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
301 20      60831300        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
302 20      60907675        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
303 20      61458191        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
304 20      61717607        .       C       T       0       .       Consensus=Poly;PacBio=Mono;Sqnm=Poly;pcr454_ss=Mono;pcr454_ps=Mono\r
305 20      61771154        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
306 20      61950497        .       G       A       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
307 20      62000091        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
308 20      62550780        .       C       T       0       .       Consensus=NoCall;PacBio=NoCall;Sqnm=NoCall;pcr454_ss=NoCall;pcr454_ps=NoCall\r
309 20      62558259        .       T       C       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r
310 20      62727205        .       C       T       0       .       Consensus=Poly;PacBio=Poly;Sqnm=Poly;pcr454_ss=Poly;pcr454_ps=Poly\r