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Dynamically respond to the number of lanes.
[htsworkflow.git] / htsworkflow / util /
2012-12-12 Diane TroutSimplify linking fastq files to their library id. tree | commitdiff
2012-11-29 Diane TroutRemove prints that were being called in test code. tree | commitdiff
2012-11-28 Diane TroutConvert to unittest2 tree | commitdiff
2012-11-28 Diane TroutConvert to unittest2 tree | commitdiff
2012-11-27 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-11-27 Diane TroutIgnoring the missing type RDF error for the page under... tree | commitdiff
2012-11-20 Diane TroutFix RDF schema problems with lane_number and species. tree | commitdiff
2012-11-20 Diane TroutChange add_default_schema to use pkg_resources feature... tree | commitdiff
2012-11-20 Diane Troutrdf:Resource can be either a resource or a blank node. tree | commitdiff
2012-11-16 Diane TroutFurther attempts to validate RDF models. tree | commitdiff
2012-11-14 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-09-27 Diane Troutolder librdf wanted to include type information when... tree | commitdiff
2012-09-24 Diane TroutDefine XHTML_RDF_DTD as None when we can't load the DTD tree | commitdiff
2012-09-24 Diane TroutMake the public html pages valid xhtml, and validate... tree | commitdiff
2012-09-20 Diane TroutMake a validation error message between different ages... tree | commitdiff
2012-09-20 Diane TroutMinor tweaks to deal with the older version of librdf... tree | commitdiff
2012-09-19 Diane TroutUse htsworkflow ontology to validate various RDF using... tree | commitdiff
2012-09-19 Diane TroutRefactor property type validator to support multiple... tree | commitdiff
2012-09-19 Diane TroutAdd stub xhtml vocab ontology, to make model validation... tree | commitdiff
2012-09-18 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... tree | commitdiff
2012-09-18 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-09-18 Diane TroutImprovements to rdfinfer. tree | commitdiff
2012-09-18 Diane TroutChange rdfhelp.dump_model so you can specify a destinat... tree | commitdiff
2012-09-18 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-09-15 Diane TroutStart implementing infering triples. tree | commitdiff
2012-09-12 Diane TroutAnother tweak to allow parser detection to work on... tree | commitdiff
2012-09-11 Diane TroutBetter parser guessing when grabbing plain text from... tree | commitdiff
2012-09-10 Diane TroutAllow retrying retrieving rdf from website a few times. tree | commitdiff
2012-09-01 Diane TroutHave librdf open the urls in load_into_model instead... tree | commitdiff
2012-08-31 Diane TroutAllow option to save/restore a sequence class to a... tree | commitdiff
2012-08-28 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-08-28 Diane Troutsanitize_literal had trouble with empty strings. tree | commitdiff
2012-06-27 Diane TroutAuto-generate a secret key for django and store in... tree | commitdiff
2012-06-21 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... tree | commitdiff
2012-05-25 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... tree | commitdiff
2012-05-25 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... tree | commitdiff
2012-05-23 Diane TroutGenerate html reports when doing sparql queries with... tree | commitdiff
2012-05-16 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-05-16 Diane TroutTweak some test code to work with librdf 1.0.10 tree | commitdiff
2012-05-12 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-05-12 Diane TroutPrepare for submitting data to geo by: tree | commitdiff
2012-05-04 Diane Trout100% test coverage for alphanum.py tree | commitdiff
2012-04-13 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2012-03-06 Diane TroutAdd module to convert multiple fastq files into a singl... tree | commitdiff
2012-03-06 Diane TroutAdd ability to print out json structures returned by... tree | commitdiff
2012-01-30 Diane TroutAdd ability to refresh library data from our htsw server tree | commitdiff
2012-01-25 Diane Troutsplit a function into two. (A query execute function... tree | commitdiff
2011-12-20 Diane TroutHandle dateTime timestamps in RDF.Nodes tree | commitdiff
2011-12-20 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-12-20 Diane TroutRemove eXecute bit from modules tree | commitdiff
2011-12-20 Diane TroutTry to figure out where UCSC is hosting our submitted... tree | commitdiff
2011-11-07 Diane TroutMerge in removal of queuecommand sleep. tree | commitdiff
2011-11-05 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-11-04 Diane TroutUse a logger initialized to the module name much more... tree | commitdiff
2011-07-29 Diane TroutConstruct unit tests for inventory/hard disk long term... tree | commitdiff
2011-07-20 Diane TroutRemove spurious debugging print statement tree | commitdiff
2011-07-13 Diane TroutMake sure we can roundtrip unicode characters via conve... tree | commitdiff
2011-07-07 Diane TroutDon't use xsd:string for string data types in toTypedNode tree | commitdiff
2011-07-07 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-07-06 Diane TroutAdd some additional logging to util/rdflib.py to help... tree | commitdiff
2011-06-30 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-06-29 Diane TroutFurther clean up ddf generation. tree | commitdiff
2011-06-23 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-06-22 Diane TroutMove parse_flowcell_id out of frontend.samples.results tree | commitdiff
2011-06-21 Diane TroutFinish new RDF based ddf construction. tree | commitdiff
2011-06-18 Diane TroutRework ucsc gather to use RDF models for gathering... tree | commitdiff
2011-06-18 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-06-17 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-06-15 Diane TroutStart to move all the RDF namespace definitions into... tree | commitdiff
2011-06-15 Diane TroutAdd module to parse UCSC DAF file. tree | commitdiff
2011-06-15 Diane TroutRemove some uneeded linefeeds tree | commitdiff
2011-05-26 Diane TroutMerge branch 'add-condition' tree | commitdiff
2011-05-09 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-05-09 Diane TroutValidate fastq files in both phred33 & phred64 versions tree | commitdiff
2011-02-17 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-02-17 Diane TroutMajor updateds to encode_find for extracting encode... tree | commitdiff
2011-01-25 rootMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow tree | commitdiff
2011-01-21 Diane TroutMerge branch 'master' of gitosis@mus.cacr.caltech.edu... tree | commitdiff
2011-01-08 Diane TroutAdd validation script 0.5.0 tree | commitdiff
2010-07-12 Diane TroutUnder some conditions urlerror doesn't have a code, tree | commitdiff
2010-06-10 Diane Troutnew api module actually needed logging. tree | commitdiff
2010-06-10 Diane TroutMove the knowledge of the urls for the REST API to... tree | commitdiff
2010-05-08 Diane TroutMatches can have trailing AGCT in addition to a number tree | commitdiff
2010-01-21 Diane TroutDon't throw an error if library.cell_line is None. tree | commitdiff
2009-10-08 Diane TroutIn some cases test_retrive_config will attempt to norma... tree | commitdiff
2009-09-28 Diane TroutModify hdquery to not die when being imported on non... tree | commitdiff
2009-09-26 Diane TroutImplement a client side config file generator. tree | commitdiff
2009-07-02 Brandon KingMade Diane's suggest json problem fix for python 2... tree | commitdiff
2009-06-30 Brandon Kingtwo json modules... one for 2.5, one for 2.6... util... tree | commitdiff
2009-06-16 Diane TroutFixed a couple of problems. tree | commitdiff
2009-06-04 Brandon KingA simple command to request the hard drive serial numbe... tree | commitdiff
2009-05-30 Diane TroutDon't print the discovered mount point. tree | commitdiff
2009-05-06 Diane TroutUpdate htsworkflow.util.fctracker module to work with... tree | commitdiff
2009-05-05 Diane TroutAllow overriding the queued commands environment. tree | commitdiff
2009-03-20 Diane TroutConsume output form the subprocesses tree | commitdiff
2009-03-18 Diane Troutonly report cwd when starting the queue monitor, not... tree | commitdiff
2009-02-13 Diane TroutMerge in the library list, detail, and results download... tree | commitdiff
2009-02-05 Diane TroutDrop 'using %s as cwd' down to just debug level. tree | commitdiff
2008-12-24 Diane TroutAdd test cases for alphanum sort tree | commitdiff
2008-12-24 Diane TroutSupport sorting numbers along with the alphanumeric... tree | commitdiff
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htsworkflow sequencing LIMS software