projects
/
htsworkflow.git
/ shortlog
commit
grep
author
committer
pickaxe
?
search:
re
summary
| shortlog |
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅
next
htsworkflow.git
2017-02-28
Diane Trout
Port test_samples to rdflib
commit
|
commitdiff
|
tree
|
snapshot
2017-02-28
Diane Trout
Port test_experiment to rdflib
commit
|
commitdiff
|
tree
|
snapshot
2017-02-28
Diane Trout
Port rdfinfer to rdflib (fixing a hidden bug)
commit
|
commitdiff
|
tree
|
snapshot
2017-02-28
Diane Trout
Port rdfhelp to rdflib from redland librdf.
commit
|
commitdiff
|
tree
|
snapshot
2017-02-28
Diane Trout
our pages are xhtml, so customize replace the django...
commit
|
commitdiff
|
tree
|
snapshot
2017-02-23
Diane Trout
Force a reasonable sort order for sample sheet
commit
|
commitdiff
|
tree
|
snapshot
2017-02-23
Diane Trout
A user object is not the same as a username
commit
|
commitdiff
|
tree
|
snapshot
2017-02-22
Diane Trout
Expect empty list instead of a 404.
commit
|
commitdiff
|
tree
|
snapshot
2017-02-22
Diane Trout
Set sort order on Lanes model.
commit
|
commitdiff
|
tree
|
snapshot
2017-02-22
Diane Trout
Whitespace change, wrap line for easier reading
commit
|
commitdiff
|
tree
|
snapshot
2017-02-18
Diane Trout
DCC tightned up their validator
commit
|
commitdiff
|
tree
|
snapshot
2017-02-18
Diane Trout
Add new paths for spreadsheet ENCODE submission.
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
Update flowcell chage_form override
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
Update referring to admin changelink static icons
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
Remove obsolete render_options, it's available in the...
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
dev laptop has a new hostname
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
Merge branch 'django1.7' of mus.cacr.caltech.edu:htswor...
commit
|
commitdiff
|
tree
|
snapshot
2017-01-11
Diane Trout
Save some example sql queries mirrored copy of encode...
commit
|
commitdiff
|
tree
|
snapshot
2016-10-21
Diane Trout
Use local.py if we don't have a host settings file
commit
|
commitdiff
|
tree
|
snapshot
2016-09-15
Diane Trout
Fix test case looking for library id
commit
|
commitdiff
|
tree
|
snapshot
2016-09-15
Diane Trout
remove unused import
commit
|
commitdiff
|
tree
|
snapshot
2016-09-15
Diane Trout
Report no data found when collections empty
commit
|
commitdiff
|
tree
|
snapshot
2016-09-14
Diane Trout
Adapt response.content for RDF and xhtml validator
commit
|
commitdiff
|
tree
|
snapshot
2016-09-14
Diane Trout
elpy+flake8 suggested some formatting improvements
commit
|
commitdiff
|
tree
|
snapshot
2016-09-14
Diane Trout
Delete temp objects to avoid constraint error
commit
|
commitdiff
|
tree
|
snapshot
2016-09-14
Diane Trout
Move to render and use simple context dictionaries
commit
|
commitdiff
|
tree
|
snapshot
2016-07-25
Diane Trout
The DCC has complained about me making a few common...
commit
|
commitdiff
|
tree
|
snapshot
2016-07-25
Diane Trout
some date cells contain two dates, which is treated...
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Remove references to migrations on topic branches
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Try providing new django apps-style configuration
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
The sort order of lanes changed breaking my test
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Define filters variable again
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Save new object before attaching to a collection
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Update custom user model for django 1.9ish.
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Remove null=True from a few fields
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Update multiplex_id max length to 255
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Query_set was renamed to queryset
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Match what generate_sample_results_tree creates
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Use find_statements instead of SPARQL for a query
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Admin url includes /change/ at the end
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Remove unused variables
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
give LaneOptions object access to the admin site
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
white-space fix
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Use render instead of render_to_response
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Use named url pattern instead of package name
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Replace permalink decorator with url reverse
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Use reverse with named url patterns
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Name all of the view that we need to reverse
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Add migrations to the small apps.
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Update template configuration for Django 1.9
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Django 1.9? replaced request.REQUEST with .GET
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Remove unused imports
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Collapse multiple imports from the same module
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Replace import * with explicit list of imports
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Switch to GenericIPAddressField
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Refactor out code to submit a single file from a loop.
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Django 1.9 deprecated string based url names and django...
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
whitespace change
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
remove unused imports
commit
|
commitdiff
|
tree
|
snapshot
2016-06-24
Diane Trout
Unicode munging for python3
commit
|
commitdiff
|
tree
|
snapshot
2016-06-21
Diane Trout
Implement writing to compressed files for qseq2fastq
commit
|
commitdiff
|
tree
|
snapshot
2016-04-20
Diane Trout
Extract part of get_json into get_response
commit
|
commitdiff
|
tree
|
snapshot
2016-04-11
Diane Trout
Initial implementation of importencoded
commit
|
commitdiff
|
tree
|
snapshot
2016-03-12
Diane Trout
Increase size of Library.multiplex_id field
commit
|
commitdiff
|
tree
|
snapshot
2015-12-03
Diane Trout
report run_type
commit
|
commitdiff
|
tree
|
snapshot
2015-12-03
Diane Trout
report if a flowcell was single or paired ended as...
commit
|
commitdiff
|
tree
|
snapshot
2015-12-03
Diane Trout
remove unused imports and variables
commit
|
commitdiff
|
tree
|
snapshot
2015-11-30
Diane Trout
make a more informative log message
commit
|
commitdiff
|
tree
|
snapshot
2015-11-30
Diane Trout
Read the first sequence out of the fastq to find the...
commit
|
commitdiff
|
tree
|
snapshot
2015-11-30
Diane Trout
refactor encode3 spreadsheet based object creation...
commit
|
commitdiff
|
tree
|
snapshot
2015-11-30
Diane Trout
remove wsgiref requirement
commit
|
commitdiff
|
tree
|
snapshot
2015-11-11
Diane Trout
argparse is in versions of python we care about
commit
|
commitdiff
|
tree
|
snapshot
2015-10-27
Diane Trout
use decorator syntax for registering admin urls
commit
|
commitdiff
|
tree
|
snapshot
2015-10-27
Diane Trout
update dotted path for python3
commit
|
commitdiff
|
tree
|
snapshot
2015-10-27
Diane Trout
update url to new standard url
commit
|
commitdiff
|
tree
|
snapshot
2015-10-27
Diane Trout
Update schema tests for upstreams release 33
commit
|
commitdiff
|
tree
|
snapshot
2015-10-27
Diane Trout
make exception dotted name python3 compliant
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
this works better with python 3...
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
apparently json.dump can write to a stream
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
Add mode to connect to the DCC and make sure the files...
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
fix import path for HTTPError exception
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
fix typo, use print_function
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
add knowledge about file links
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
updates to deal with encoded 33 path changes
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
Merge branch 'django1.7' of mus.cacr.caltech.edu:htswor...
commit
|
commitdiff
|
tree
|
snapshot
2015-10-20
Diane Trout
move run_aws_cp command out of class to make it easier...
commit
|
commitdiff
|
tree
|
snapshot
2015-09-24
Diane Trout
Return read_length for file properties
commit
|
commitdiff
|
tree
|
snapshot
2015-09-23
Diane Trout
Use a re.split so we can accept both ', ' and ',' betwe...
commit
|
commitdiff
|
tree
|
snapshot
2015-09-08
Diane Trout
indicate we want text not bytes
commit
|
commitdiff
|
tree
|
snapshot
2015-09-08
Diane Trout
covert to using python3 config.get fallback=
commit
|
commitdiff
|
tree
|
snapshot
2015-09-08
Diane Trout
convert from optparse to argparse
commit
|
commitdiff
|
tree
|
snapshot
2015-09-08
Diane Trout
add some documentation -- shocking I know
commit
|
commitdiff
|
tree
|
snapshot
2015-07-20
Diane Trout
python3 byte vs str compatibility for constructing...
commit
|
commitdiff
|
tree
|
snapshot
2015-07-20
Diane Trout
script to help remigrate from old sqlite database to...
commit
|
commitdiff
|
tree
|
snapshot
2015-07-20
Diane Trout
configuration file largely only useful for emacs elpy...
commit
|
commitdiff
|
tree
|
snapshot
2015-07-20
Diane Trout
sort load_accession to make it easier to find things
commit
|
commitdiff
|
tree
|
snapshot
2015-05-28
Diane Trout
remove unused imports
commit
|
commitdiff
|
tree
|
snapshot
2015-05-26
Diane Trout
rename datarun to sequencing run, and propogate the...
commit
|
commitdiff
|
tree
|
snapshot
2015-05-26
Diane Trout
set a created datetime in the factory, since I removed...
commit
|
commitdiff
|
tree
|
snapshot
2015-05-21
Diane Trout
remove unused import
commit
|
commitdiff
|
tree
|
snapshot
next