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htsworkflow.git
2015-01-14 Diane Troutfix spelling error in module name commit | commitdiff | tree | snapshot
2015-01-13 Diane TroutDon't pass null authentication information to ENCODED. commit | commitdiff | tree | snapshot
2015-01-13 Diane Troutuse absolute_import and print_function commit | commitdiff | tree | snapshot
2015-01-13 Diane TroutUpdate inventory tests to use factory boy. commit | commitdiff | tree | snapshot
2015-01-12 Diane Troutmove the file type test cases out into their own module commit | commitdiff | tree | snapshot
2015-01-12 Diane Troutuse migrations for experiments, and use migrations... commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutget_schema_url only works on object types now, so chang... commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutat some point I added code that used base64, hashlib... commit | commitdiff | tree | snapshot
2015-01-10 Diane TroutForgot to disable loading ClusterStation and Sequencer... commit | commitdiff | tree | snapshot
2015-01-10 Diane TroutConvert experiments modules to use factories instead... commit | commitdiff | tree | snapshot
2015-01-10 Diane TroutImprove samples_factory generated objects. commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutunimportant whitespace changes, at least the lines... commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutwhitespace changes commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutfix typo -- or at least make it consistent. antigen... commit | commitdiff | tree | snapshot
2015-01-10 Diane Troutmove cluster station and sequencer tests out into their... commit | commitdiff | tree | snapshot
2015-01-10 Diane TroutUse logger instead of trying to print to stdout. especi... commit | commitdiff | tree | snapshot
2015-01-09 Diane Troutone should only return json objects. so put our arrays... commit | commitdiff | tree | snapshot
2014-12-13 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor... commit | commitdiff | tree | snapshot
2014-12-13 Diane TroutAdd document registration class. commit | commitdiff | tree | snapshot
2014-12-13 Diane Troutadd more type checking for parsing object type from... commit | commitdiff | tree | snapshot
2014-12-13 Diane Troutadd some helpful log messages commit | commitdiff | tree | snapshot
2014-12-01 Diane Troutadd ability to adjust some log level messages commit | commitdiff | tree | snapshot
2014-12-01 Diane Troutcommit script to copy jumpgate sqlite database to felca... commit | commitdiff | tree | snapshot
2014-12-01 Diane Troutrequire django 1.7 and factory boy for newer test code commit | commitdiff | tree | snapshot
2014-11-07 Diane TroutAdd some code to help read metadata out of spreadsheets. commit | commitdiff | tree | snapshot
2014-11-03 Diane Troutforgot to change one test to use factory commit | commitdiff | tree | snapshot
2014-11-01 Diane TroutThe makemigrations code didn't like how I was setting... commit | commitdiff | tree | snapshot
2014-11-01 Diane Troutname get_query_set was deprecated in favor of get_queryset commit | commitdiff | tree | snapshot
2014-11-01 Diane TroutConvert samples app to use migrations. commit | commitdiff | tree | snapshot
2014-10-29 Diane TroutMerge branch 'django1.7' of mus.cacr.caltech.edu:htswor... commit | commitdiff | tree | snapshot
2014-10-29 Diane Troutactually don't track the sqlite3 database commit | commitdiff | tree | snapshot
2014-10-27 Diane Troutcomment out benderjab dependency, as were not using... commit | commitdiff | tree | snapshot
2014-10-27 Diane TroutChange the settings default to work with the two scoops... commit | commitdiff | tree | snapshot
2014-10-23 Diane Troutimport os, so we can use os.path.join commit | commitdiff | tree | snapshot
2014-09-24 Diane Troutrelax requirements to make it easier to install on... commit | commitdiff | tree | snapshot
2014-09-12 Diane Troutmake it easier to override variables in ENCODED class commit | commitdiff | tree | snapshot
2014-07-28 Diane Troutadd frozen package list commit | commitdiff | tree | snapshot
2014-07-26 Diane Troutconfigure a mock keyring commit | commitdiff | tree | snapshot
2014-07-25 Diane Troutmake whitespace pep8 complient commit | commitdiff | tree | snapshot
2014-07-25 Diane TroutUse two-scoop style multiple settings file. commit | commitdiff | tree | snapshot
2014-07-24 Diane TroutDCC example code sets both content-type and accept... commit | commitdiff | tree | snapshot
2014-07-24 Diane Troutpep8 whitespace cleanup. commit | commitdiff | tree | snapshot
2014-07-24 Diane Troutcreate exception using modern python syntax commit | commitdiff | tree | snapshot
2014-07-24 Diane Troutremove a commented out import commit | commitdiff | tree | snapshot
2014-07-24 Diane TroutFlatten project hierarchy, moving djano applications... commit | commitdiff | tree | snapshot
2014-06-23 Diane Troutwhitespace cleanup commit | commitdiff | tree | snapshot
2014-06-23 Diane Troutclean up for pep8 compliance. commit | commitdiff | tree | snapshot
2014-06-23 Diane Troutcode cleanup, remove commented out code and adjust... commit | commitdiff | tree | snapshot
2014-06-23 Diane TroutAttempt to split common initial data from wold lab... commit | commitdiff | tree | snapshot
2014-06-23 Diane TroutRemove very old misplaced initial data fixtures commit | commitdiff | tree | snapshot
2014-06-19 Diane TroutAdd fields list to a few ModelForms Meta class. commit | commitdiff | tree | snapshot
2014-06-19 Diane TroutRename get_query_set to get_queryset commit | commitdiff | tree | snapshot
2014-06-19 Diane TroutRename HttpResponse parameter mimetype to content_type commit | commitdiff | tree | snapshot
2014-06-19 Diane Troutremove file created by typoing file name commit | commitdiff | tree | snapshot
2014-06-19 Diane TroutChange unittest2 back into unittest. commit | commitdiff | tree | snapshot
2014-06-19 Diane TroutExplicitly list initial_data.json for the test data... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutAdd post_json as some DCC objects are created with... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutRename headers to json_headers for requests (seemed... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutUpdates to jsonld context for the DCC schemas. commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutUpdate test_encoded test cases due to https now being... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutDCC switched to https commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutUpdate fastqname code & test code to better support... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutDirectly generate compressed fastq files from HiSeq... commit | commitdiff | tree | snapshot
2014-06-10 Diane Troutthe filename templates were moved from condorfastq... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutIndicate when desplit_fastq didn't get any files to... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutMake sure we can load a run file that lacks alignment... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutFor some reason the previous integrety fixes, added... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutPostgresql has referential integrety checking. commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutIgnore the path when comparing filenames from the md5... commit | commitdiff | tree | snapshot
2014-06-10 Diane Troutuse autoopen to access fastq files commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutStart implementing tool to compute library fastq quality commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutJust use the python 2 url parsers instead of trying... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutUpdate timestamps in inventory app test data to be... commit | commitdiff | tree | snapshot
2014-06-10 Diane Troutpoint default flowcell directory to test data commit | commitdiff | tree | snapshot
2014-06-10 Diane Troutadd default values for some application specific values commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutConfigure default STATICFILES_DIRS for static files... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutMathematica had a suggestion for a fastq mime type... commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutRegex pattern was wrong. commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutConvert more timestamps to include timezone commit | commitdiff | tree | snapshot
2014-06-10 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow commit | commitdiff | tree | snapshot
2014-02-18 Diane TroutAdd option to compress fastq file commit | commitdiff | tree | snapshot
2014-02-12 Diane TroutAllow arbitrarily long regexes in experiment.FileType... commit | commitdiff | tree | snapshot
2014-01-22 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow commit | commitdiff | tree | snapshot
2014-01-22 Diane Troutpass filters a string not an undefined variable commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutRemove django test environment setup code. commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutUse SkipIf to skip copier tests if benderjab isn't... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutConvert timestamps from the runfolder file to a timezon... commit | commitdiff | tree | snapshot
2014-01-17 Diane Troutdjango provides django.utils.timezone.now to return... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutSet default timezone to where our lab is located commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutUpdate test data dates to have timezone information commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutFix test to use newer django database dictionary instea... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutRe-add default email addresses for email notification... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutImplement a encoded search to json-ld wrapper. commit | commitdiff | tree | snapshot
2014-01-17 Diane Troutmake sure @vocab url has a trailing #. Its needed to... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutUse new context creation functions to attach context... commit | commitdiff | tree | snapshot
2014-01-17 Diane TroutAdd functions to create a json-ld context and add names... commit | commitdiff | tree | snapshot
2014-01-15 Diane TroutUtility class for accessing ENCODE3's submit / data... commit | commitdiff | tree | snapshot
2014-01-15 Diane TroutAdapter to use PyLD's json-ld parser to add triples... commit | commitdiff | tree | snapshot
2014-01-15 Diane Troutremove some trailing whitespace commit | commitdiff | tree | snapshot
2014-01-15 Diane Troutremove some trailing whitespace commit | commitdiff | tree | snapshot
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