htsworkflow.git
2008-06-07 Brandon KingTagging v0.1.11 - Run XML view implementation (bug... 0.1.11
2008-06-07 Brandon KingErr, missed a spot.
2008-06-07 Brandon KingMinor bug fix... destroying your own dictionary in...
2008-06-06 Brandon KingUltra-raw output of run_xml data implemented. The sorti...
2008-06-06 Brandon KingBack porting Diane's ethelp.py from the trunk to v0...
2008-06-05 Brandon KingBack porting Diane's runfolder.py from the trunk to...
2008-06-05 Brandon KingBack porting Diane's gerald.py from the trunk to v0...
2008-06-05 Brandon KingBack porting Diane's firecrest.py from the trunk to...
2008-06-05 Brandon KingBack porting Diane's bustard.py from the trunk to v0...
2008-06-04 Brandon KingAdded link to Summary.htm files if they are available.
2008-05-28 Brandon King * Added option to use default return type by adding...
2008-05-28 Brandon KingUpdated mime types of large files to prevent killing...
2008-05-28 Brandon KingBed file generation is here!
2008-05-27 Brandon KingBackporting makebed.py to v0.1.x branch
2008-05-27 Brandon KingBackporting fctracker.py to v0.1.x branch
2008-05-24 Brandon Kinglibrary view: eland_result files accessible now
2008-05-23 Brandon KingBack porting Diane's opener.py from trunk to v0.1.x...
2008-05-23 Brandon KingAdding slightly more meaningful display of library...
2008-05-21 Brandon KingAdded custom view to display libraries, when a library...
2008-04-19 Lorian SchaefferBlatant misappropriation of a mostly-blank field to...
2008-04-19 Lorian SchaefferAdded ability to filter for RNAseq libraries, now that...
2008-04-18 Lorian SchaefferMinor display changes
2008-04-18 Lorian SchaefferAdded options to stopping_point dropdown. Also changed...
2008-04-17 Brandon KingMaking a branch for v0.1.x as Lorian needs a bug to...
2008-02-20 Brandon KingTagging working version before major database changes... 0.1.0
2008-01-29 Diane TroutDummyOptions didn't define a genome_dir member before...
2008-01-23 Diane Troutreturn most recent genome build for the pipeline config...
2008-01-23 Brandon KingLatest genome build, eland_config file temp. solution...
2008-01-17 Brandon KingAdded a new get_cycles(recipe_xml_filepath) function in
2008-01-16 Brandon KingSpoolwatch function for getting cycle number from Recip...
2008-01-16 Brandon KingAttempt to support case insensitive config file names.
2008-01-16 Brandon KingFix for tickets #45 & #47
2008-01-15 Diane TroutOops, forgot to provide a null body to my the stub...
2008-01-15 Diane Troutpyinotify rm_watch takes a list, not a dictionary.
2008-01-15 Diane TroutUpdate test_copier to reflect copiers move to gaworkflo...
2008-01-15 Diane Troutmove the autotmation scripts into gaworkflow.automation
2008-01-11 Diane TroutAdd the xmi file from umbrello documenting our basic...
2008-01-09 Diane Troutalways trigger a copy when we receive the sequencingFin...
2008-01-08 Diane Trouttell subversion to ignore *.py[co~] files
2008-01-08 Diane Troutmake sequencingFinished return something instead of...
2008-01-08 Diane TroutRemove unnecessary code from the runner.py module
2008-01-08 Diane TroutAdd script to make it easier to launch runner
2008-01-04 Diane Troutuse \w for alphanumeric flow cell IDs
2008-01-04 Brandon KingRunner now reports status when user sends status request!
2008-01-04 Brandon KingRunner now notifies users about success or failure...
2008-01-04 Brandon KingRunner seems to work with running the pipeline when...
2008-01-04 Brandon KingWork towards getting runner to work properly.
2008-01-04 Brandon KingOk, one more option required.
2008-01-04 Brandon KingForgot an option in the DummyOptions object.
2008-01-03 Brandon KingWork towards disabling command-line parsing outside...
2008-01-02 Brandon KingUpdated regexs to support new and "improved" flow cell...
2007-12-30 Diane Troutdirentry parser wasn't eating a trailing newline
2007-12-30 Diane Troutforgot to rename the caller and called when refactoring...
2007-12-30 Diane Troutsplit rsync directory listing correctly
2007-12-22 Diane Troutadd a , to make customizing list of template dirs easier
2007-12-21 Brandon KingWork towards a working runner bot... still needs a...
2007-12-14 Brandon King[project @ gaworkflow.runner progress]
2007-12-11 Diane Trout[project @ add skeleton for runner]
2007-12-11 Diane Trout[project @ send messages to notify_runner not self...
2007-12-11 Brandon King[project @ Bypass pipe lock mystery bug for configure...
2007-12-11 Diane Trout[project @ add a parser to spoolwatcher]
2007-12-04 Brandon King[project @ Config Step: Detect missing cycles patch]
2007-12-10 Diane Trout[project @ rename runFinished to sequencingFinished]
2007-12-10 Diane Trout[project @ make spoolwatcher a benderjab bot]
2007-12-10 Diane Trout[project @ use XmlRpcBot.rpc_send]
2007-12-10 Diane Trout[project @ Require a resource for JIDs that are used...
2007-12-10 Diane Trout[project @ moved check_option into benderjab]
2007-12-08 Diane Trout[project @ update CopierBot to new logging daemonizable...
2007-11-30 Brandon King[project @ Allow user to provide FC##### to download...
2007-11-30 Brandon King[project @ Small documentation fix for retrieve_config.]
2007-11-30 Brandon King[project @ Scientific name is no longer a unique field.]
2007-11-27 Brandon King[project @ Updating setup.py]
2007-11-27 Brandon King[project @ Missing __init__.py file in pipeline subpack...
2007-11-26 Brandon King[project @ run_status gerald correction (over estimated...
2007-11-26 Brandon King[project @ run_status correct firecrest expected file...
2007-11-22 Brandon King[project @ Run default changed to full run]
2007-11-22 Brandon King[project @ Shortend the s_generating regex; minor bug...
2007-11-21 Brandon King[project @ Monitor status implementation + config_pipel...
2007-11-20 Brandon King[project @ Added GARunStatus class for tracking percent...
2007-11-20 Brandon King[project @ Moved ga_frontend to gaworkflow.frontend...
2007-11-20 Diane Trout[project @ move brandon's pipeline handling code into...
2007-11-20 Diane Trout[project @ rename python module to gaworkflow from...
2007-11-19 Brandon King[project @ changed config file section from 'server_inf...
2007-11-19 Brandon King[project @ Removing bin/config_pipeline.py (use config_...
2007-11-17 Brandon King[project @ Download Cfg, Use genome mapper, configure...
2007-11-17 Brandon King[project @ retrieve_eland_config.py catches two new...
2007-11-17 Brandon King[project @ Minor cleanup patch]
2007-11-17 Brandon King[project @ Species and build to valid genome dir mapper!]
2007-11-17 Brandon King[project @ Use genome build patch]
2007-11-17 Brandon King[project @ Proof of concept!!!]
2007-11-16 Brandon King[project @ Method 2 for monitoring pipeline run (based...
2007-11-16 Brandon King[project @ Handling of missing app errors with running...
2007-11-15 Brandon King[project @ Work toward pipeline monitor code (WARNING...
2007-11-15 Brandon King[project @ Runs pipeline on successful config + traceback]
2007-11-14 Brandon King[project @ Now handles stderr output.]
2007-11-14 Brandon King[project @ Better handling of configuring pipeline...
2007-11-14 Brandon King[project @ First attempt at script for configuring...
2007-11-13 Brandon King[project @ Updated eland_config app to generate config...
2007-11-12 Brandon King[project @ Url should be <host>/eland_config/ in this...
2007-11-12 Brandon King[project @ The rest of the rename fix.]
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