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allow verticle scrollbar for sequence browser widget
2006-10-28
Diane Trout
allow verticle scrollbar for sequence browser widget
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2006-10-28
Diane Trout
compute the correct starting window size
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2006-10-27
Diane Trout
use pointers for zoom spinbox in ZoomWidget
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2006-10-27
Diane Trout
Use Qt4.2 openUrl to show manual
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2006-10-27
Diane Trout
implement set window state
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2006-10-26
Diane Trout
include icon extension for os x bundle information
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2006-10-26
Diane Trout
add copy sequence as string option
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2006-10-26
Diane Trout
display number of basepairs copied
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2006-10-24
Diane Trout
tagged release_1.0_rc3
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2006-10-24
Diane Trout
call set_soft_threshold after subanalysis
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2006-10-23
Diane Trout
Enable Qt4 tests
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2006-10-20
Diane Trout
add nl to end of 3 files
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2006-10-20
Diane Trout
avoid multiple calls to setSoftThreshold
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2006-10-20
Diane Trout
copy motifs to a new subanalysis
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2006-10-19
Diane Trout
fix motif loader under release build
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2006-10-19
Diane Trout
Sequence::rev_comp works on subsequences
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2006-10-18
Diane Trout
add to_upper_case to some sequence unittests
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2006-10-17
Diane Trout
be more forging of user provided file names
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2006-10-17
Diane Trout
remove old code
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2006-10-17
Diane Trout
ignore eclipse settings
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2006-10-17
Diane Trout
add a manually updated version number.
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2006-10-17
Diane Trout
test_mussa_python also had an unecesary QtOpenGL library...
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2006-10-17
Diane Trout
attempt to make buildnum.py generate a useful header
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2006-10-17
Diane Trout
motif save should have a default extension.
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2006-10-17
Diane Trout
don't like QTOPENGL to python module
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2006-10-17
Diane Trout
changing motifs should make the analysis dirty
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2006-10-17
Diane Trout
always add a blank motif
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2006-10-17
Diane Trout
more python interface to Sequence
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2006-10-17
Diane Trout
force loaded sequence to uppercase
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2006-10-17
Diane Trout
validate app bundle before shipping
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2006-10-17
Diane Trout
don't link against X11 on OS X
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2006-10-14
Diane Trout
don't seqcomp sequences that are too small
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2006-10-14
Diane Trout
add operator< to ConservedPath
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2006-10-13
Diane Trout
save motifs with the analysis
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2006-10-13
Diane Trout
pass default_dir around
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2006-10-13
Diane Trout
change default_dir to a QDir
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2006-10-12
Diane Trout
cleanup image save dialog aesthetics
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2006-10-12
Diane Trout
tabs are of the devil
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2006-10-12
Diane Trout
Fix initialization of QtAssistant
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2006-10-12
Diane Trout
better glyph offset computation
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2006-10-12
Diane Trout
does createLocalAlignment work for a 3 way?
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2006-10-12
Diane Trout
add implementation for save motif menu item
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2006-10-12
Diane Trout
Make help a bit more reliable
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2006-10-11
Diane Trout
lookup python code with c++
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2006-10-11
Diane Trout
Validate motif input
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2006-10-11
Diane Trout
add Mussa::save_motif()
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2006-10-11
Diane Trout
throw errors when spirit parsing fails
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2006-10-11
Diane Trout
use spinboxes for the setup analysis dialog
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2006-10-11
Diane Trout
a title of path("/my/silly/path") doesn't work on windows
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2006-10-11
Diane Trout
use lines if a quad would be smaller than a pixel
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2006-10-10
Diane Trout
initialize the motif_editor with analysis motifs
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2006-10-10
Diane Trout
implement alphabet for sequence
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2006-10-05
Diane Trout
length 1 segments should be drawn as lines
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2006-10-05
Diane Trout
draw link lines with a width
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2006-10-04
Diane Trout
add --motifs
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2006-10-04
Diane Trout
trigger motif update from loadMotifList
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2006-10-04
Diane Trout
fixes for Mussa::load_motif
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2006-10-04
Diane Trout
colors should default to being visible
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2006-10-03
Diane Trout
Add window titles
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2006-06-15
Diane Trout
fix wrong parent for scrollable_browser
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2006-10-03
Diane Trout
Add ReadOnly ThresholdWidget to MussaAlignedWindow
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2006-10-03
Diane Trout
Use pointers in ThresholdWidget
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2006-10-03
Diane Trout
Allow MussaAlignedWindows to create subanalyses
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2006-10-03
Diane Trout
Death to stupid mussa pointers
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2006-10-02
Diane Trout
add updateTitle
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2006-10-02
Diane Trout
Make MussaWindow UI objects pointers
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2006-09-29
Diane Trout
better motif editor
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2006-09-21
Diane Trout
If we don't need any python link libraries don't produce...
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2006-09-19
Diane Trout
catch possible segfault with get_sequence()
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2006-09-18
Diane Trout
need a cassert
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2006-09-18
Diane Trout
Remember to include Platform to get PYTHON_LINK_LIBARIES
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2006-09-18
Diane Trout
ask python what libraries we need to link with
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2006-09-16
Diane Trout
Load saved analysis can open new windows
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2006-09-15
Diane Trout
if you need to do a save as, you really don't need...
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2006-09-15
Diane Trout
remember the last directory we were did something in
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2006-09-15
Diane Trout
remove reporting the current path from the about box
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2006-09-15
Diane Trout
use the loaded analysis path as the default save path
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2006-09-15
Diane Trout
always save
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2006-09-15
Diane Trout
keep track of a subsequences parent
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2006-09-15
Diane Trout
report our "start/stop" location on a subsequence
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2006-09-15
Diane Trout
use an enum instead of a bool for strandedness
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2006-09-15
Diane Trout
make our Color class serializable
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2006-09-14
Diane Trout
do a better job of erasing the browser sidebars
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2006-09-14
Diane Trout
make sure we show the start of our sequence name
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2006-09-14
Diane Trout
Implement an optional name in the motif parser
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2006-09-13
Diane Trout
MussaSetupDialog remembers previous load directory
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2006-09-13
Diane Trout
default saveAnalysisAs to users home directory
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2006-09-12
Diane Trout
warn the user if we're going to replace an analysis
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2006-09-12
Diane Trout
implement "typical" save and close conventions.
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2006-09-12
Diane Trout
track where our analysis is saved and if the analysis...
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2006-09-12
Diane Trout
implement analysis save as dialog
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2006-09-12
Diane Trout
add seq_forward
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2006-09-09
Diane Trout
make really sure load_mupa has a file to parse.
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2006-09-08
Diane Trout
subsequences now use offsets into the shared_ptr seq_string
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2006-09-08
Diane Trout
catch a few more potential unchecked shared_ptr dereferences.
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2006-09-07
Diane Trout
remove commented out string conversion
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2006-09-07
Diane Trout
Figured out how to serialize a shared_ptr<string>
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2006-09-07
Diane Trout
go back to using const char * in seqcomp
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2006-08-30
Diane Trout
use shared_ptr to store the sequence string
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2006-08-29
Diane Trout
put basepair alphabets into the Sequence class
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