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add some newlines at the end of some of our files
2007-01-05 Diane Troutadd some newlines at the end of some of our files
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2007-01-04 Diane Troutconditionally build the paircomp tests
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2007-01-04 Diane Troutpaircomp used the string find_first_not_of
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2007-01-04 Diane Troutsplit unittests into seperate executables
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2006-12-21 Diane Troutbuild paircomp if available
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2006-12-14 Diane Troutlen(mussa.paths()) should equal the number of found...
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2006-12-13 Diane Troutbe resistent to not creating the browser
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2006-12-13 Diane Troutmake mussawindow initialize icons
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2006-12-13 Diane Trouttry to reduce number of moveToThread warnings
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2006-12-12 Diane Troutfix infinite loop for absolute pathnames
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2006-12-07 Diane Troutprovide get_py and get_py_ptr
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2006-12-07 Diane Troutcut down on unnecessary linking to the python library
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2006-12-07 Diane TroutAllocating objects in the constructor causes problems
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2006-12-05 Diane Troutmake compiled in python extension initialization more...
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2006-12-05 Diane Troutdirectly build the python extension modules
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2006-12-05 Diane Troutprovide python interpreter for mussa qui via a seperate...
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2006-11-30 Diane Troutallow adding and viewing sequences to an analysis from...
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2006-11-29 Diane Troutadd python interface to seqcomp
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2006-11-22 Diane TroutFinish off setting sequence offset user interface
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2006-11-21 Diane Troutquick option to show sequence properties window
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2006-11-21 Diane Troutrename ok/cancel to okButton/cancelButton
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2006-11-21 Diane Troutfix bad #ifdef names
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2006-11-17 Diane Troutmore fs::native for user supplied paths
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2006-11-02 Diane Troutinclude sequence property editor source files
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2006-11-01 Diane Troutallow copying files into a dmg
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2006-10-31 Diane Troutupdate CMakeLists.txt to build new SequencePropertiesWindow
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2006-10-31 Diane Troutupdate osxdist for qt4.2.1
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2006-10-30 Diane Troutmove SubanalysisWindow code to a subdirectory
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2006-10-30 Diane Troutinclude filename in unparsable annotation error message
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2006-10-30 Diane Troutreport filename for invalid fasta files
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2006-10-28 Diane Troutdon't use staticly allocated widgets
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2006-10-28 Diane Troutadd include QCloseEvent to MussaWindow.hpp
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2006-10-28 Diane Troutallow verticle scrollbar for sequence browser widget
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2006-10-28 Diane Troutcompute the correct starting window size
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2006-10-27 Diane Troutuse pointers for zoom spinbox in ZoomWidget
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2006-10-27 Diane TroutUse Qt4.2 openUrl to show manual
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2006-10-27 Diane Troutimplement set window state
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2006-10-26 Diane Troutinclude icon extension for os x bundle information
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2006-10-26 Diane Troutadd copy sequence as string option
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2006-10-26 Diane Troutdisplay number of basepairs copied
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2006-10-24 Diane Trouttagged release_1.0_rc3
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2006-10-24 Diane Troutcall set_soft_threshold after subanalysis
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2006-10-23 Diane TroutEnable Qt4 tests
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2006-10-20 Diane Troutadd nl to end of 3 files
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2006-10-20 Diane Troutavoid multiple calls to setSoftThreshold
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2006-10-20 Diane Troutcopy motifs to a new subanalysis
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2006-10-19 Diane Troutfix motif loader under release build
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2006-10-19 Diane TroutSequence::rev_comp works on subsequences
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2006-10-18 Diane Troutadd to_upper_case to some sequence unittests
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2006-10-17 Diane Troutbe more forging of user provided file names
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2006-10-17 Diane Troutremove old code
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2006-10-17 Diane Troutignore eclipse settings
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2006-10-17 Diane Troutadd a manually updated version number.
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2006-10-17 Diane Trouttest_mussa_python also had an unecesary QtOpenGL library...
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2006-10-17 Diane Troutattempt to make buildnum.py generate a useful header
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2006-10-17 Diane Troutmotif save should have a default extension.
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2006-10-17 Diane Troutdon't like QTOPENGL to python module
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2006-10-17 Diane Troutchanging motifs should make the analysis dirty
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2006-10-17 Diane Troutalways add a blank motif
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2006-10-17 Diane Troutmore python interface to Sequence
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2006-10-17 Diane Troutforce loaded sequence to uppercase
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2006-10-17 Diane Troutvalidate app bundle before shipping
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2006-10-17 Diane Troutdon't link against X11 on OS X
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2006-10-14 Diane Troutdon't seqcomp sequences that are too small
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2006-10-14 Diane Troutadd operator< to ConservedPath
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2006-10-13 Diane Troutsave motifs with the analysis
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2006-10-13 Diane Troutpass default_dir around
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2006-10-13 Diane Troutchange default_dir to a QDir
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2006-10-12 Diane Troutcleanup image save dialog aesthetics
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2006-10-12 Diane Trouttabs are of the devil
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2006-10-12 Diane TroutFix initialization of QtAssistant
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2006-10-12 Diane Troutbetter glyph offset computation
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2006-10-12 Diane Troutdoes createLocalAlignment work for a 3 way?
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2006-10-12 Diane Troutadd implementation for save motif menu item
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2006-10-12 Diane TroutMake help a bit more reliable
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2006-10-11 Diane Troutlookup python code with c++
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2006-10-11 Diane TroutValidate motif input
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2006-10-11 Diane Troutadd Mussa::save_motif()
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2006-10-11 Diane Troutthrow errors when spirit parsing fails
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2006-10-11 Diane Troutuse spinboxes for the setup analysis dialog
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2006-10-11 Diane Trouta title of path("/my/silly/path") doesn't work on windows
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2006-10-11 Diane Troutuse lines if a quad would be smaller than a pixel
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2006-10-10 Diane Troutinitialize the motif_editor with analysis motifs
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2006-10-10 Diane Troutimplement alphabet for sequence
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2006-10-05 Diane Troutlength 1 segments should be drawn as lines
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2006-10-05 Diane Troutdraw link lines with a width
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2006-10-04 Diane Troutadd --motifs
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2006-10-04 Diane Trouttrigger motif update from loadMotifList
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2006-10-04 Diane Troutfixes for Mussa::load_motif
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2006-10-04 Diane Troutcolors should default to being visible
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2006-10-03 Diane TroutAdd window titles
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2006-06-15 Diane Troutfix wrong parent for scrollable_browser
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2006-10-03 Diane TroutAdd ReadOnly ThresholdWidget to MussaAlignedWindow
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2006-10-03 Diane TroutUse pointers in ThresholdWidget
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2006-10-03 Diane TroutAllow MussaAlignedWindows to create subanalyses
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2006-10-03 Diane TroutDeath to stupid mussa pointers
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2006-10-02 Diane Troutadd updateTitle
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2006-10-02 Diane TroutMake MussaWindow UI objects pointers
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2006-09-29 Diane Troutbetter motif editor
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2006-09-21 Diane TroutIf we don't need any python link libraries don't produce...
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MUSSA multi-species alignment tool