massive code move
authorDiane Trout <diane@caltech.edu>
Sat, 4 Feb 2006 00:38:24 +0000 (00:38 +0000)
committerDiane Trout <diane@caltech.edu>
Sat, 4 Feb 2006 00:38:24 +0000 (00:38 +0000)
commit5adb8d9425a4662e790664faa82dce851efc577d
treebb9ae01a7e29f4bef5203d174892a5176d11af5c
parent9e228210dba75f00f2cdae6d4706b36dff8a729a
massive code move
mussa_gui_ was redundant so i moved all of those modules into
gui/
Also I used the non-recursive gnu make style build system.
And lastly there are some Doxygen compatible bits of doucmentation thrown in
here.
64 files changed:
Doxyfile [new file with mode: 0644]
Makefile
flp.cc [deleted file]
flp.cxx [new file with mode: 0644]
flp.hh
flp_seqcomp.cc [deleted file]
flp_seqcomp.cxx [new file with mode: 0644]
gui/AnnotWindow.cxx [new file with mode: 0644]
gui/AnnotWindow.hh [new file with mode: 0644]
gui/ConnView.cxx [new file with mode: 0644]
gui/ConnView.hh [new file with mode: 0644]
gui/ConnWindow.cxx [new file with mode: 0644]
gui/ConnWindow.hh [new file with mode: 0644]
gui/MotifWindow.cxx [new file with mode: 0644]
gui/MotifWindow.hh [new file with mode: 0644]
gui/SeqTextWindow.cxx [new file with mode: 0644]
gui/SeqTextWindow.hh [new file with mode: 0644]
gui/SeqView.cxx [new file with mode: 0644]
gui/SeqView.hh [new file with mode: 0644]
gui/SeqWindow.cxx [new file with mode: 0644]
gui/SeqWindow.hh [new file with mode: 0644]
gui/SetupWindow.cxx [new file with mode: 0644]
gui/SetupWindow.hh [new file with mode: 0644]
gui/SubAnalysisWindow.cxx [new file with mode: 0644]
gui/SubAnalysisWindow.hh [new file with mode: 0644]
gui/module.mk [new file with mode: 0644]
module.mk [new file with mode: 0644]
mussa.cc [deleted file]
mussa.cxx [new file with mode: 0644]
mussa_class.cc [deleted file]
mussa_class.cxx [new file with mode: 0644]
mussa_class.hh
mussa_gui_annot_window.cc [deleted file]
mussa_gui_annot_window.hh [deleted file]
mussa_gui_conn_view.cc [deleted file]
mussa_gui_conn_view.hh [deleted file]
mussa_gui_conn_window.cc [deleted file]
mussa_gui_conn_window.hh [deleted file]
mussa_gui_load_window.cc [deleted file]
mussa_gui_load_window.hh [deleted file]
mussa_gui_motif_window.cc [deleted file]
mussa_gui_motif_window.hh [deleted file]
mussa_gui_seq.cc [deleted file]
mussa_gui_seq.hh [deleted file]
mussa_gui_seq_text.cc [deleted file]
mussa_gui_seq_text.hh [deleted file]
mussa_gui_seq_view.cc [deleted file]
mussa_gui_seq_view.hh [deleted file]
mussa_gui_subana.cc [deleted file]
mussa_gui_subana.hh [deleted file]
mussa_nway.cc [deleted file]
mussa_nway.cxx [new file with mode: 0644]
mussa_nway.hh
mussa_nway_entropy.cc [deleted file]
mussa_nway_entropy.cxx [new file with mode: 0644]
mussa_nway_other.cc [deleted file]
mussa_nway_other.cxx [new file with mode: 0644]
mussa_nway_refine.cc [deleted file]
mussa_nway_refine.cxx [new file with mode: 0644]
seqcomp.cc [deleted file]
seqcomp.cxx [new file with mode: 0644]
sequence.cc [deleted file]
sequence.cxx [new file with mode: 0644]
sequence.hh