projects / mussa.git / search
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Implement an optional name in the motif parser
2006-09-14 Diane TroutImplement an optional name in the motif parser
 commit | commitdiff | tree
2006-09-13 Diane TroutMussaSetupDialog remembers previous load directory
 commit | commitdiff | tree
2006-09-13 Diane Troutdefault saveAnalysisAs to users home directory
 commit | commitdiff | tree
2006-09-12 Diane Troutwarn the user if we're going to replace an analysis
 commit | commitdiff | tree
2006-09-12 Diane Troutimplement "typical" save and close conventions.
 commit | commitdiff | tree
2006-09-12 Diane Trouttrack where our analysis is saved and if the analysis...
commit | commitdiff | tree
2006-09-12 Diane Troutimplement analysis save as dialog
 commit | commitdiff | tree
2006-09-12 Diane Troutadd seq_forward
 commit | commitdiff | tree
2006-09-09 Diane Troutmake really sure load_mupa has a file to parse.
 commit | commitdiff | tree
2006-09-08 Diane Troutsubsequences now use offsets into the shared_ptr seq_string
 commit | commitdiff | tree
2006-09-08 Diane Troutcatch a few more potential unchecked shared_ptr dereferences.
 commit | commitdiff | tree
2006-09-07 Diane Troutremove commented out string conversion
 commit | commitdiff | tree
2006-09-07 Diane TroutFigured out how to serialize a shared_ptr<string>
 commit | commitdiff | tree
2006-09-07 Diane Troutgo back to using const char * in seqcomp
 commit | commitdiff | tree
2006-08-30 Diane Troutuse shared_ptr to store the sequence string
 commit | commitdiff | tree
2006-08-29 Diane Troutput basepair alphabets into the Sequence class
 commit | commitdiff | tree
2006-08-29 Diane Troutgo back to sequence being its own class
 commit | commitdiff | tree
2006-08-31 Diane TroutThere's something wrong with the Qt tests, skip for...
commit | commitdiff | tree
2006-08-31 Diane Troutfedora needs -lutil for python to build
 commit | commitdiff | tree
2006-08-31 Diane Troutneed to #include <cassert> if i'm going to use asserts
 commit | commitdiff | tree
2006-08-29 Diane Troutforgot namespace declaration on some conditional code
 commit | commitdiff | tree
2006-08-24 Diane Troutstart trying to figure out where the documentation is
 commit | commitdiff | tree
2006-08-24 Diane Troutupdate sequence serialization to support the xml archive
 commit | commitdiff | tree
2006-08-23 Diane TroutAllow changing the name for a sequence in the sequence...
commit | commitdiff | tree
2006-08-22 Diane Troutcatch the other spurious class decoration
 commit | commitdiff | tree
2006-08-22 Diane Troutremove unnecessary class member decoration
 commit | commitdiff | tree
2006-08-12 Diane TroutFix merge issues with the win32 library patch
 commit | commitdiff | tree
2006-08-11 Diane TroutUpdate SequenceDescription to have signal/slots
 commit | commitdiff | tree
2006-08-11 Diane Troutdo a better job of grouping seqbrowser sidebar information.
 commit | commitdiff | tree
2006-08-10 Diane TroutTry alpha blending the conservation paths
 commit | commitdiff | tree
2006-08-10 Diane Troutremove the useless hide motif button.
 commit | commitdiff | tree
2006-08-10 Diane TroutLet the annotation parser skip html tags
 commit | commitdiff | tree
2006-08-09 Diane TroutImplement serialize for sequence
 commit | commitdiff | tree
2006-08-09 Diane Troutstart breaking save out from Mussa::analyze()
 commit | commitdiff | tree
2006-08-09 Diane TroutAdd documentation about Mussa::soft_threshold
 commit | commitdiff | tree
2006-08-09 Diane Troutremove mck3test.museq and .muway
 commit | commitdiff | tree
2006-08-09 Diane TroutAdd serialization library to FindBoost
 commit | commitdiff | tree
2006-08-09 Diane Troutadd dirty flag
 commit | commitdiff | tree
2006-08-09 Diane Troutchange from cout to clog in some commented out debugging...
commit | commitdiff | tree
2006-07-29 Diane Troutset mussa analysis name in MussaSetupWidget
 commit | commitdiff | tree
2006-07-28 Diane Troutupdate osxdist to point to qt 4.1.4
 commit | commitdiff | tree
2006-07-28 Diane Troutfix ticket:115 display sequences in order added
 commit | commitdiff | tree
2006-07-28 Diane TroutUse CMAKE_BINARY_DIR instead of the very wrong MUSSA_BINARY_DIR
 commit | commitdiff | tree
2006-07-28 Diane TroutSince building with cmake 2.2 didn't work up the required...
commit | commitdiff | tree
2006-07-28 Diane Troutset current doc url
 commit | commitdiff | tree
2006-07-28 Diane TroutImplement a convienence class for accessing python...
commit | commitdiff | tree
2006-07-27 Diane Troutrename glseq.width to glseq.size in gl.py
 commit | commitdiff | tree
2006-07-27 Diane Troutupdate gl.py to show how to add an annotation
 commit | commitdiff | tree
2006-07-27 Diane Troutadd annot and motif classes to python interface
 commit | commitdiff | tree
2006-07-27 Diane Troutupdate gl.py glut example code
 commit | commitdiff | tree
2006-07-27 Diane Troutuse QT_QTASSISTANT_FOUND when detecting QtAssistant
 commit | commitdiff | tree
2006-07-27 Diane Troutfix problems instantiating mussa.GlSequence
 commit | commitdiff | tree
2006-07-27 Diane Troutmake it possible to build mussa with python
 commit | commitdiff | tree
2006-07-26 Diane TroutUse BOOST_PYTHON_LIBRARY as python library guard
 commit | commitdiff | tree
2006-07-22 Diane Troutuniversal ld wrapper script
 commit | commitdiff | tree
2006-07-21 Diane TroutBuild universal binaries on OS X
 commit | commitdiff | tree
2006-07-15 Diane TroutProvide an app icon on OS X
 commit | commitdiff | tree
2006-07-15 Diane Troutinclude images used for bioinformatics journal club...
commit | commitdiff | tree
2006-07-13 Diane Troutstart the trivial sequence filter
 commit | commitdiff | tree
2006-07-11 Diane Troutignore another build name
 commit | commitdiff | tree
2006-07-11 Diane Troutupdate os x building tools
 commit | commitdiff | tree
2006-07-11 Diane TroutTest for RST2HTML and BOOST_PYTHON_LIB
 commit | commitdiff | tree
2006-07-11 Diane Troutfix spelling error
 commit | commitdiff | tree
2006-07-10 Diane TroutPresentation for bioinformatics club.
 commit | commitdiff | tree
2006-07-08 Diane Troutstart of presentation for bioinformatics journal club...
commit | commitdiff | tree
2006-07-06 Diane TroutEmpty Subanalyses should not be run
 commit | commitdiff | tree
2006-07-06 Diane TroutWrite cmake scripts for building the html manual
 commit | commitdiff | tree
2006-07-05 Diane TroutSequenceLocationModel::clear should actually clear...
commit | commitdiff | tree
2006-07-05 Diane Troutremove MotifDetail:: from function in class declaration
 commit | commitdiff | tree
2006-07-01 Diane TroutSequenceLocation was being intialized with left,right
 commit | commitdiff | tree
2006-07-01 Diane Troutmake sure subsequences have a species name
 commit | commitdiff | tree
2006-07-01 Diane Troutmake subanalysis window editable
 commit | commitdiff | tree
2006-07-01 Diane TroutImplement UI for subanalysis mode
 commit | commitdiff | tree
2006-06-30 Diane Troutfix boost::python sequence interface
 commit | commitdiff | tree
2006-06-30 Diane Troutstore motifs as sequences instead of strings
 commit | commitdiff | tree
2006-06-30 Diane TroutAllow disabling motifs
 commit | commitdiff | tree
2006-06-30 Diane Troutmove edit motifs to the edit menu option
 commit | commitdiff | tree
2006-06-29 Diane Troutset_motifs should erase the previous motifs
 commit | commitdiff | tree
2006-06-29 Diane Troutallow specifying a name for a sequence
 commit | commitdiff | tree
2006-06-29 Diane Troutupdate the annotation grammer to make species name...
commit | commitdiff | tree
2006-06-29 Diane Troutview sequence alignment is a more biologically useful...
commit | commitdiff | tree
2006-06-29 Diane Troutbreak the core of add_motifs loop into a seperate function
 commit | commitdiff | tree
2006-06-29 Diane TroutAllow setting a name for a motif
 commit | commitdiff | tree
2006-06-26 Diane TroutTailorization
 commit | commitdiff | tree
2006-06-23 Diane TroutGetting closer to a subanalysis mode
 commit | commitdiff | tree
2006-06-21 Diane TroutMore progress toward subanalysis
 commit | commitdiff | tree
2006-06-21 Diane Troutuse a specific exception when nextTo breaks
 commit | commitdiff | tree
2006-06-20 Diane Troutextend annotation names and types to allow punctuation
 commit | commitdiff | tree
2006-06-17 Diane Troutadd view alignment to the sequence browser context...
commit | commitdiff | tree
2006-06-17 Diane Troutmake Sequence a subclass of std::string
 commit | commitdiff | tree
2006-06-16 Diane Troutremove unnecessary class decoration
 commit | commitdiff | tree
2006-06-16 Diane Troutticket:104 fix some pointer problems with MussaAlignedWindow
 commit | commitdiff | tree
2006-06-15 Diane Troutshare one instance of the copySelectedSequenceAsFastaAction
 commit | commitdiff | tree
2006-06-15 Diane TroutDisabled code to try and get bundle path on OS X
 commit | commitdiff | tree
2006-06-15 Diane TroutTell CMake not to include QtAssistant if not available
 commit | commitdiff | tree
2006-06-15 Diane Troutbe more informative when DISPLAY isn't set under unix
 commit | commitdiff | tree
2006-06-15 Diane Trouttry to make including QtAssistant optional
 commit | commitdiff | tree
2006-06-15 Diane Troutdon't bother to build the old fltk code base
 commit | commitdiff | tree
2006-06-14 Diane TroutAMD64 build support
 commit | commitdiff | tree
2006-06-14 Diane TroutMake cmake happier about my target declariation order
 commit | commitdiff | tree
next
MUSSA multi-species alignment tool