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mark the example submission rule files as being raw, so the escapes dont get confused
[htsworkflow.git] / htsworkflow / pipelines / eland.py
2013-12-17 Diane TroutMerge branch 'django1.4' commit | commitdiff
2013-10-17 Diane TroutMerge branch 'master' into django1.4 commit | commitdiff
2013-01-09 Diane TroutA better resolution to a possible circular dependency. commit | commitdiff
2012-07-10 Diane TroutCreate a class to convert contig names into genome... commit | commitdiff
2012-07-10 Diane TroutGuess genome name for building compressed mapping count... commit | commitdiff
2012-07-07 Diane TroutUse sample keys when looking up lane parameters. commit | commitdiff
2012-07-06 Diane TroutSwitch to regular dictionary instead of ordered dictionary. commit | commitdiff
2012-07-05 Diane TroutMassively rework eland file finding and indexing. commit | commitdiff
2012-06-30 Diane TroutDisable debug messages for each scanned eland file... commit | commitdiff
2012-06-30 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow commit | commitdiff
2012-06-30 Diane TroutSupport multiple having an eland file split into multip... commit | commitdiff
2012-06-21 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... commit | commitdiff
2012-05-25 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... commit | commitdiff
2012-05-25 Diane TroutMerge ssh://jumpgate.caltech.edu/var/htsworkflow/htswor... commit | commitdiff
2012-05-16 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow commit | commitdiff
2012-05-16 Diane Troutupdate summary.py to extract data from HiSeq runs. commit | commitdiff
2011-11-05 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow commit | commitdiff
2011-11-04 Diane TroutUse a logger initialized to the module name much more... commit | commitdiff
2011-10-04 Diane TroutAdd support for flowcells analyzed with Casava 1.7 commit | commitdiff
2011-09-12 Diane TroutAdd support for first-gen HiSeq flowcells (e.g. ABXX) commit | commitdiff
2010-09-24 Diane TroutHandle the case when a sequencing lane lacks any yield... commit | commitdiff
2010-09-10 Diane TroutAdd support for CASAVA 1.7 commit | commitdiff
2009-06-19 Diane TroutI started using ResultLane, so stop treating it like... commit | commitdiff
2009-06-17 Diane TroutLoading really old run xml files caused the website... commit | commitdiff
2009-05-11 Diane TroutFix parameter list for base class. commit | commitdiff
2009-05-05 Diane TroutHandle lanes that were only sequenced. commit | commitdiff
2009-04-24 Diane Troutadd --clean option to runfolder commit | commitdiff
2009-03-16 Diane TroutParse runfolders generated with IPAR 1.3 and pipeline... commit | commitdiff
2009-02-13 Diane Troutsave longer comment describing change commit | commitdiff
2009-02-13 Diane TroutAparently some more recent version of multi eland stopped commit | commitdiff
2009-02-13 Diane TroutMerge in the library list, detail, and results download... commit | commitdiff
2009-01-06 Diane TroutLook in Temp directories for some of the files we have... commit | commitdiff
2008-12-24 Diane TroutHandle paired-end eland files. commit | commitdiff
2008-12-10 Diane TroutThe summary parsing code now seems to handle paired... commit | commitdiff
2008-11-06 Diane TroutProcess eland extended (or multi) read files. commit | commitdiff
2008-10-30 Diane TroutThe htsworkflow.pipelines.gerald module was getting... commit | commitdiff
htsworkflow sequencing LIMS software