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minimally wrap drawable
[mussa.git]
/
alg
/
mussa.cpp
2007-08-03
Diane Trout
remove excess cout call
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2007-08-03
Diane Trout
make the mupa parser more robust
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2007-08-03
Diane Trout
add threshold/window flag getter/setters
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2007-04-20
Brandon King
Load saved muway and set to muways soft threshold.
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2007-04-19
Diane Trout
improve mupa comment character parsing
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2007-04-19
Diane Trout
make mupa file loading eol-style insensitive
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2007-04-18
Brandon King
Load N sequences in Mussa::load
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2007-04-03
Diane Trout
fix problems with motif changes not showing up in seque...
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2007-03-31
Diane Trout
test motif editor
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2007-03-24
Diane Trout
move strand into seqspan
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2006-12-05
Diane Trout
provide python interpreter for mussa qui via a seperate...
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2006-11-17
Diane Trout
more fs::native for user supplied paths
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2006-10-27
Diane Trout
implement set window state
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2006-10-19
Diane Trout
fix motif loader under release build
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2006-10-17
Diane Trout
be more forging of user provided file names
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2006-10-17
Diane Trout
changing motifs should make the analysis dirty
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2006-10-14
Diane Trout
don't seqcomp sequences that are too small
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2006-10-13
Diane Trout
save motifs with the analysis
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2006-10-11
Diane Trout
add Mussa::save_motif()
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2006-10-11
Diane Trout
throw errors when spirit parsing fails
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2006-10-10
Diane Trout
implement alphabet for sequence
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2006-10-04
Diane Trout
fixes for Mussa::load_motif
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2006-10-03
Diane Trout
Add window titles
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2006-09-15
Diane Trout
use the loaded analysis path as the default save path
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2006-09-14
Diane Trout
Implement an optional name in the motif parser
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2006-09-12
Diane Trout
implement "typical" save and close conventions.
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2006-09-12
Diane Trout
track where our analysis is saved and if the analysis...
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2006-09-09
Diane Trout
make really sure load_mupa has a file to parse.
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2006-08-29
Diane Trout
go back to sequence being its own class
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2006-08-09
Diane Trout
start breaking save out from Mussa::analyze()
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2006-08-09
Diane Trout
add dirty flag
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2006-08-09
Diane Trout
change from cout to clog in some commented out debuggin...
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2006-07-29
Diane Trout
set mussa analysis name in MussaSetupWidget
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2006-06-30
Diane Trout
store motifs as sequences instead of strings
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2006-06-29
Diane Trout
set_motifs should erase the previous motifs
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2006-06-29
Diane Trout
allow specifying a name for a sequence
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2006-06-29
Diane Trout
break the core of add_motifs loop into a seperate function
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2006-06-23
Diane Trout
Getting closer to a subanalysis mode
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2006-06-21
Diane Trout
More progress toward subanalysis
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2006-06-17
Diane Trout
make Sequence a subclass of std::string
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2006-06-03
Diane Trout
use Qt Signals & Slots for progress tracking
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2006-05-27
Diane Trout
add callback for tracking analysis progress
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2006-05-27
Diane Trout
rename [gset_soft_thres to [gs]et_soft_threshold]
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2006-05-20
Diane Trout
turn color back on
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2006-05-20
Diane Trout
ticket:62 fix local alignment
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2006-04-07
Diane Trout
switch to using boost::filesystem
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2006-03-28
Diane Trout
recover threshold and window size
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2006-03-21
Diane Trout
provide a user interface to edit motifs
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2006-03-16
Diane Trout
track labels
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2006-03-14
Diane Trout
load and display a motif list
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2006-03-14
Diane Trout
just load the sequence
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2006-03-12
Diane Trout
There can be only one (filename convention)
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