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Removed 'create subanalysis' from menu for now (until implemented)
[mussa.git] / alg /
2006-03-21 Diane Troutprovide a user interface to edit motifs tree | commitdiff
2006-03-21 Diane Trouthopefully this fixes the off by one error tree | commitdiff
2006-03-20 Diane Troutresizing increases the viewable world tree | commitdiff
2006-03-20 Diane TroutMussa aligned sequence view seems to work tree | commitdiff
2006-03-19 Diane Troutdraw alignment lines tree | commitdiff
2006-03-19 Diane Troutrender sequence correctly in mussa aligned window tree | commitdiff
2006-03-19 Diane Troutimplement zoom in terms of base pairs per pixel tree | commitdiff
2006-03-18 Diane Troutcenter on path tree | commitdiff
2006-03-18 Diane Troutdefine window for showing a mussa alignment tree | commitdiff
2006-03-17 Diane Troutrefactored PathScene into SequenceBrowserWidget tree | commitdiff
2006-03-16 Diane Trouttrack labels tree | commitdiff
2006-03-16 Diane Troutre-implement selection tree | commitdiff
2006-03-16 Diane Troutcomputation for a path segment was wrong tree | commitdiff
2006-03-15 Diane Troutmake the path view independent of type of connection tree | commitdiff
2006-03-14 Diane Troutload and display a motif list tree | commitdiff
2006-03-14 Diane Troutdocument win_append, thres_append tree | commitdiff
2006-03-14 Diane Troutjust load the sequence tree | commitdiff
2006-03-14 Diane Troutattach motifs to a sequence object tree | commitdiff
2006-03-12 Diane Troutimplement a color mapper class tree | commitdiff
2006-03-12 Diane TroutThere can be only one (filename convention) tree | commitdiff
2006-03-11 Diane TroutThicker bars, better letters tree | commitdiff
2006-03-11 Diane Troutrefactor glsequence to be more testable tree | commitdiff
2006-03-09 Diane Troutresolve complicated merge conflict tree | commitdiff
2006-03-08 Diane Troutfix segfault when changing soft threshold when no analy... tree | commitdiff
2006-03-06 Diane Troutdrawing sequence basepairs. tree | commitdiff
2006-03-04 Diane Troutpython wrap mussa, nwaypaths, and conservedpaths tree | commitdiff
2006-03-04 Diane Troutselect paths and highlight them tree | commitdiff
2006-03-03 Diane Troutimprove error handling for loading tree | commitdiff
2006-03-03 Diane Troutwe can load parameter files tree | commitdiff
2006-03-02 Diane Troutrefining an empty pathz would cause a segfault tree | commitdiff
2006-03-02 Diane Trouthacked thresholding tree | commitdiff
2006-03-02 Diane Troutuse ConservedPath class instead of vector<int> tree | commitdiff
2006-02-28 Diane Troutmove glsequence into "alg" component tree | commitdiff
2006-03-01 Diane Troutcleanup nway code tree | commitdiff
2006-03-01 Diane Troutline rendering fixes tree | commitdiff
2006-03-08 Diane Troutmove glsequence into "alg" comonent tree | commitdiff
2006-02-28 Diane Troutshow conservation paths tree | commitdiff
2006-02-28 Diane Troutfix many mussa_class.cxx warnings tree | commitdiff
2006-02-28 Diane Troutadvance_sp_itor_track was triggering an infinite loop tree | commitdiff
2006-02-28 Diane Troutrender the sequences from the mussa analysis tree | commitdiff
2006-02-25 Diane Troutreduce warning messages in sequence.cxx tree | commitdiff
2006-02-24 Diane Troutrefactor nway_other.cxx tree | commitdiff
2006-02-24 Diane Troutuse exceptions to indicate Mussa::analyze failed tree | commitdiff
2006-02-24 Diane Troutonly include headers by names relative to project base... tree | commitdiff
2006-02-23 Diane Troutfixing the number of sequences at setup is silly tree | commitdiff
2006-02-23 Diane Troutfix inability to do reverse compliments tree | commitdiff
2006-02-23 Diane Troutmore thoroughly document FLPs tree | commitdiff
2006-02-23 Diane Troutrefactor and test FLPs tree | commitdiff
2006-02-22 Diane Troutrename mussa_nway to nway_paths tree | commitdiff
2006-02-22 Diane Troutrename the_Seqs to the_seqs tree | commitdiff
2006-02-22 Diane Troutload a mupa file and test it tree | commitdiff
2006-02-22 Diane Troutadd get_analysis_mode_name tree | commitdiff
2006-02-22 Diane Troutrefactor and test sequence class tree | commitdiff
2006-02-22 Diane Troutput exception definitions in one place and use them tree | commitdiff
2006-02-22 Diane Troutrename some mussa_class members (ana_name to analysis_name) tree | commitdiff
2006-02-22 Diane Troutremove library blessings tree | commitdiff
2006-02-21 Diane Troutbreak algorithm out into a subdirectory. tree | commitdiff
MUSSA multi-species alignment tool