woldlab.caltech.edu Git - mussa.git/history

2007-03-31	Diane Trout	test motif editor	blob \| commitdiff \| raw
2007-03-24	Diane Trout	move strand into seqspan	blob \| commitdiff \| raw \| diff to current
2006-12-05	Diane Trout	provide python interpreter for mussa qui via a seperate...	blob \| commitdiff \| raw \| diff to current
2006-11-17	Diane Trout	more fs::native for user supplied paths	blob \| commitdiff \| raw \| diff to current
2006-10-27	Diane Trout	implement set window state	blob \| commitdiff \| raw \| diff to current
2006-10-19	Diane Trout	fix motif loader under release build	blob \| commitdiff \| raw \| diff to current
2006-10-17	Diane Trout	be more forging of user provided file names	blob \| commitdiff \| raw \| diff to current
2006-10-17	Diane Trout	changing motifs should make the analysis dirty	blob \| commitdiff \| raw \| diff to current
2006-10-14	Diane Trout	don't seqcomp sequences that are too small	blob \| commitdiff \| raw \| diff to current
2006-10-13	Diane Trout	save motifs with the analysis	blob \| commitdiff \| raw \| diff to current
2006-10-11	Diane Trout	add Mussa::save_motif()	blob \| commitdiff \| raw \| diff to current
2006-10-11	Diane Trout	throw errors when spirit parsing fails	blob \| commitdiff \| raw \| diff to current
2006-10-10	Diane Trout	implement alphabet for sequence	blob \| commitdiff \| raw \| diff to current
2006-10-04	Diane Trout	fixes for Mussa::load_motif	blob \| commitdiff \| raw \| diff to current
2006-10-03	Diane Trout	Add window titles	blob \| commitdiff \| raw \| diff to current
2006-09-15	Diane Trout	use the loaded analysis path as the default save path	blob \| commitdiff \| raw \| diff to current
2006-09-14	Diane Trout	Implement an optional name in the motif parser	blob \| commitdiff \| raw \| diff to current
2006-09-12	Diane Trout	implement "typical" save and close conventions.	blob \| commitdiff \| raw \| diff to current
2006-09-12	Diane Trout	track where our analysis is saved and if the analysis...	blob \| commitdiff \| raw \| diff to current
2006-09-09	Diane Trout	make really sure load_mupa has a file to parse.	blob \| commitdiff \| raw \| diff to current
2006-08-29	Diane Trout	go back to sequence being its own class	blob \| commitdiff \| raw \| diff to current
2006-08-09	Diane Trout	start breaking save out from Mussa::analyze()	blob \| commitdiff \| raw \| diff to current
2006-08-09	Diane Trout	add dirty flag	blob \| commitdiff \| raw \| diff to current
2006-08-09	Diane Trout	change from cout to clog in some commented out debuggin...	blob \| commitdiff \| raw \| diff to current
2006-07-29	Diane Trout	set mussa analysis name in MussaSetupWidget	blob \| commitdiff \| raw \| diff to current
2006-06-30	Diane Trout	store motifs as sequences instead of strings	blob \| commitdiff \| raw \| diff to current
2006-06-29	Diane Trout	set_motifs should erase the previous motifs	blob \| commitdiff \| raw \| diff to current
2006-06-29	Diane Trout	allow specifying a name for a sequence	blob \| commitdiff \| raw \| diff to current
2006-06-29	Diane Trout	break the core of add_motifs loop into a seperate function	blob \| commitdiff \| raw \| diff to current
2006-06-23	Diane Trout	Getting closer to a subanalysis mode	blob \| commitdiff \| raw \| diff to current
2006-06-21	Diane Trout	More progress toward subanalysis	blob \| commitdiff \| raw \| diff to current
2006-06-17	Diane Trout	make Sequence a subclass of std::string	blob \| commitdiff \| raw \| diff to current
2006-06-03	Diane Trout	use Qt Signals & Slots for progress tracking	blob \| commitdiff \| raw \| diff to current
2006-05-27	Diane Trout	add callback for tracking analysis progress	blob \| commitdiff \| raw \| diff to current
2006-05-27	Diane Trout	rename [gset_soft_thres to [gs]et_soft_threshold]	blob \| commitdiff \| raw \| diff to current
2006-05-20	Diane Trout	turn color back on	blob \| commitdiff \| raw \| diff to current
2006-05-20	Diane Trout	ticket:62 fix local alignment	blob \| commitdiff \| raw \| diff to current
2006-04-07	Diane Trout	switch to using boost::filesystem	blob \| commitdiff \| raw \| diff to current
2006-03-28	Diane Trout	recover threshold and window size	blob \| commitdiff \| raw \| diff to current
2006-03-21	Diane Trout	provide a user interface to edit motifs	blob \| commitdiff \| raw \| diff to current
2006-03-16	Diane Trout	track labels	blob \| commitdiff \| raw \| diff to current
2006-03-14	Diane Trout	load and display a motif list	blob \| commitdiff \| raw \| diff to current
2006-03-14	Diane Trout	just load the sequence	blob \| commitdiff \| raw \| diff to current
2006-03-12	Diane Trout	There can be only one (filename convention)	blob \| commitdiff \| raw \| diff to current

MUSSA multi-species alignment tool

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