woldlab.caltech.edu Git - htsworkflow.git/commit

author	Tim Reddy Tim <treddy@hudsonalpha.org>
	Tue, 25 Nov 2008 19:15:40 +0000 (19:15 +0000)
committer	Tim Reddy Tim <treddy@hudsonalpha.org>
	Tue, 25 Nov 2008 19:15:40 +0000 (19:15 +0000)
commit	9339e4521ae732598b50f3f64ddbb28c1430a60d
tree	e7d6816853d0cd5b64ffd3140f776cf5ee71e2df	tree \| snapshot
parent	04994ea1d5a77639ccc6bc011d1ab106fb62acf7	commit \| diff

Major analysis server update. Had to switch to a new server, and used the opportunity to move 100% to running from repository code.

2036 files changed:

htswanalysis/INSTALL_NOTES		diff \| blob \| history
htswanalysis/MACS/00README	[deleted file]	blob \| history
htswanalysis/MACS/COPYING	[deleted file]	blob \| history
htswanalysis/MACS/ChangeLog	[deleted file]	blob \| history
htswanalysis/MACS/INSTALL	[deleted file]	blob \| history
htswanalysis/MACS/lib/PeakDetect.py	[deleted file]	blob \| history
htswanalysis/MACS/lib/PeakModel.py	[deleted file]	blob \| history
htswanalysis/MACS/lib/TabIO/__init__.py	[deleted file]	blob \| history
htswanalysis/MACS/lib/__init__.py	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/__init__.py	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/cdf.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/gsl-histogram	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/gsl-randist	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.0.dylib	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.0.dylib.dSYM/Contents/Info.plist	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.0.dylib.dSYM/Contents/Resources/DWARF/libgsl.0.dylib	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.a	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.dylib	[deleted symlink]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/.libs/libgsl.lai	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/AUTHORS	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/BUGS	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/COPYING	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/ChangeLog	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/INSTALL	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/Makefile	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/Makefile.in	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/NEWS	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/README	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/SUPPORT	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/THANKS	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/aclocal.m4	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/autogen.sh	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/blas/.libs/libgslblas.a	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/blas/gsl_blas.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/blas/gsl_blas_types.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/.libs/libgslblock.a	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/block/block.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/block_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/file.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/fprintf_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/fwrite_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_char.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_complex_double.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_complex_float.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_complex_long_double.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_double.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_float.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_int.h	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_uchar.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_uint.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_ulong.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_block_ushort.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/gsl_check_range.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/init.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/init_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/test.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/test_complex_io.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/test_complex_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/test_io.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/block/test_source.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/.libs/libgslbspline.a	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/ChangeLog	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/Makefile	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/Makefile.am	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/TODO	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/bspline.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/gsl_bspline.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/bspline/test.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.0.dylib	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.0.dylib.dSYM/Contents/Info.plist	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.0.dylib.dSYM/Contents/Resources/DWARF/libgslcblas.0.dylib	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.a	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.dylib	[deleted symlink]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/.libs/libgslcblas.lai	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/ChangeLog	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/caxpy.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cblas.h	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/ccopy.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cdotc_sub.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cdotu_sub.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cgbmv.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cgemm.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cgemv.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cgerc.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/cgeru.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/chbmv.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/chemm.c	[deleted file]	blob \| history
htswanalysis/MACS/lib/gsl/gsl-1.11/cblas/chemv.c	[deleted file]	blob \| history
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htswanalysis/MACS/lib/gsl/gsl-1.11/wavelet/wavelet.c	[deleted file]	blob \| history
htswanalysis/MACS/setup.py	[deleted file]	blob \| history
htswanalysis/bin/macs	[deleted file]	blob \| history
htswanalysis/scripts/ConfigureTasks.pm		diff \| blob \| history
htswanalysis/scripts/Flowcell_QC_Makefile		diff \| blob \| history
htswanalysis/scripts/primer_design.pm		diff \| blob \| history
htswanalysis/src/Makefile		diff \| blob \| history
htswanalysis/src/ValidationDesign/defs.h		diff \| blob \| history
htswanalysis/src/ValidationDesign/refine_peaks.cpp		diff \| blob \| history
htswanalysis/src/profile_reads_against_features.cpp		diff \| blob \| history

htsworkflow sequencing LIMS software

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